Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.65□□□□□ -0.7
Hmga2P52927 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hmga2P52927 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hmga2P52927 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hmga2P52927 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
Hmga2P52927 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.65□□□□□ -0.7
Hmga2P52927 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hmga2P52927 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Hmga2P52927 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hmga2P52927 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Hmga2P52927 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hmga2P52927 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Hmga2P52927 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Hmga2P52927 Gm8805-201ENSMUST00000117848 313 ntBASIC10.65□□□□□ -0.7
Hmga2P52927 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.65□□□□□ -0.7
Hmga2P52927 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.65□□□□□ -0.7
Hmga2P52927 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC10.65□□□□□ -0.7
Hmga2P52927 Gm15429-201ENSMUST00000151268 798 ntBASIC10.65□□□□□ -0.7
Hmga2P52927 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Hmga2P52927 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hmga2P52927 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC10.65□□□□□ -0.7
Hmga2P52927 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.65□□□□□ -0.7
Hmga2P52927 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Hmga2P52927 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hmga2P52927 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hmga2P52927 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hmga2P52927 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hmga2P52927 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Hmga2P52927 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hmga2P52927 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hmga2P52927 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.65□□□□□ -0.7
Hmga2P52927 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hmga2P52927 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Hmga2P52927 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hmga2P52927 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hmga2P52927 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Hmga2P52927 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Hmga2P52927 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Hmga2P52927 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.65□□□□□ -0.71
Hmga2P52927 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Hmga2P52927 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hmga2P52927 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Hmga2P52927 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hmga2P52927 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Hmga2P52927 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hmga2P52927 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hmga2P52927 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Hmga2P52927 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Hmga2P52927 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hmga2P52927 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hmga2P52927 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hmga2P52927 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Hmga2P52927 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hmga2P52927 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Hmga2P52927 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hmga2P52927 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC10.64□□□□□ -0.71
Hmga2P52927 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
Hmga2P52927 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC10.64□□□□□ -0.71
Hmga2P52927 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC10.64□□□□□ -0.71
Hmga2P52927 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hmga2P52927 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC10.64□□□□□ -0.71
Hmga2P52927 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Hmga2P52927 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Hmga2P52927 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Hmga2P52927 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Hmga2P52927 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Hmga2P52927 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC10.64□□□□□ -0.71
Hmga2P52927 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hmga2P52927 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.64□□□□□ -0.71
Hmga2P52927 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Hmga2P52927 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hmga2P52927 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hmga2P52927 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC10.64□□□□□ -0.71
Hmga2P52927 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.64□□□□□ -0.71
Hmga2P52927 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hmga2P52927 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hmga2P52927 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Hmga2P52927 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hmga2P52927 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Hmga2P52927 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Hmga2P52927 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hmga2P52927 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.63□□□□□ -0.71
Hmga2P52927 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hmga2P52927 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hmga2P52927 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hmga2P52927 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hmga2P52927 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hmga2P52927 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hmga2P52927 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Hmga2P52927 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
Hmga2P52927 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Hmga2P52927 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hmga2P52927 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.63□□□□□ -0.71
Hmga2P52927 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Hmga2P52927 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hmga2P52927 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hmga2P52927 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hmga2P52927 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Hmga2P52927 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Hmga2P52927 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms