Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-6P43688 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-6P43688 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-6P43688 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-6P43688 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-6P43688 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Nkx2-6P43688 Gm12015-201ENSMUST00000117065 843 ntBASIC11.88□□□□□ -0.51
Nkx2-6P43688 Gm13996-201ENSMUST00000118456 430 ntBASIC11.88□□□□□ -0.51
Nkx2-6P43688 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Nkx2-6P43688 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-6P43688 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Nkx2-6P43688 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Nkx2-6P43688 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.88□□□□□ -0.51
Nkx2-6P43688 Gm19208-201ENSMUST00000213861 912 ntBASIC11.88□□□□□ -0.51
Nkx2-6P43688 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-6P43688 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-6P43688 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-6P43688 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-6P43688 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-6P43688 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-6P43688 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-6P43688 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.88□□□□□ -0.51
Nkx2-6P43688 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Nkx2-6P43688 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-6P43688 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Nkx2-6P43688 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Nkx2-6P43688 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.88□□□□□ -0.51
Nkx2-6P43688 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-6P43688 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx2-6P43688 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.87□□□□□ -0.51
Nkx2-6P43688 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-6P43688 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-6P43688 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-6P43688 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.87□□□□□ -0.51
Nkx2-6P43688 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-6P43688 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-6P43688 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-6P43688 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-6P43688 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Nkx2-6P43688 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Nkx2-6P43688 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.87□□□□□ -0.51
Nkx2-6P43688 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.87□□□□□ -0.51
Nkx2-6P43688 Gm15703-201ENSMUST00000120250 880 ntBASIC11.87□□□□□ -0.51
Nkx2-6P43688 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.87□□□□□ -0.51
Nkx2-6P43688 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.87□□□□□ -0.51
Nkx2-6P43688 Gm43138-201ENSMUST00000199123 708 ntBASIC11.87□□□□□ -0.51
Nkx2-6P43688 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-6P43688 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-6P43688 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-6P43688 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.87□□□□□ -0.51
Nkx2-6P43688 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Nkx2-6P43688 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-6P43688 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Nkx2-6P43688 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx2-6P43688 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.87□□□□□ -0.51
Nkx2-6P43688 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.87□□□□□ -0.51
Nkx2-6P43688 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-6P43688 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Gm14832-201ENSMUST00000121289 322 ntBASIC11.86□□□□□ -0.51
Nkx2-6P43688 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Gm27341-201ENSMUST00000183570 106 ntBASIC11.86□□□□□ -0.51
Nkx2-6P43688 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Nkx2-6P43688 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.86□□□□□ -0.51
Nkx2-6P43688 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Gm10312-201ENSMUST00000078515 489 ntBASIC11.86□□□□□ -0.51
Nkx2-6P43688 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.86□□□□□ -0.51
Nkx2-6P43688 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.86□□□□□ -0.51
Nkx2-6P43688 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms