Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 AC134537.1-201ENSMUST00000219205 265 ntBASIC18.35■□□□□ 0.53
Chd1P40201 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd1P40201 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd1P40201 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Chd1P40201 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd1P40201 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd1P40201 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Chd1P40201 Gm9924-202ENSMUST00000192760 2311 ntBASIC18.35■□□□□ 0.53
Chd1P40201 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd1P40201 Gm5780-201ENSMUST00000217774 1834 ntBASIC18.35■□□□□ 0.53
Chd1P40201 Gm13039-201ENSMUST00000118638 794 ntBASIC18.35■□□□□ 0.53
Chd1P40201 Gm15982-201ENSMUST00000121681 554 ntBASIC18.35■□□□□ 0.53
Chd1P40201 Gm16030-201ENSMUST00000159098 603 ntBASIC18.35■□□□□ 0.53
Chd1P40201 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chd1P40201 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC18.35■□□□□ 0.53
Chd1P40201 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC18.35■□□□□ 0.53
Chd1P40201 Gm36982-201ENSMUST00000193796 1128 ntBASIC18.35■□□□□ 0.53
Chd1P40201 Gm35960-201ENSMUST00000202712 767 ntBASIC18.35■□□□□ 0.53
Chd1P40201 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC18.35■□□□□ 0.53
Chd1P40201 AC105408.1-201ENSMUST00000227771 802 ntBASIC18.35■□□□□ 0.53
Chd1P40201 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.35■□□□□ 0.53
Chd1P40201 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chd1P40201 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd1P40201 AC137950.2-202ENSMUST00000227150 1635 ntBASIC18.34■□□□□ 0.53
Chd1P40201 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Chd1P40201 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd1P40201 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Chd1P40201 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC18.34■□□□□ 0.53
Chd1P40201 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chd1P40201 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd1P40201 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chd1P40201 Gm18642-201ENSMUST00000206642 1400 ntBASIC18.34■□□□□ 0.53
Chd1P40201 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Chd1P40201 Gm13700-201ENSMUST00000118624 1128 ntBASIC18.34■□□□□ 0.53
Chd1P40201 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC18.34■□□□□ 0.53
Chd1P40201 Gm45094-201ENSMUST00000207013 617 ntBASIC18.34■□□□□ 0.53
Chd1P40201 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd1P40201 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Chd1P40201 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd1P40201 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC18.34■□□□□ 0.53
Chd1P40201 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chd1P40201 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd1P40201 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC18.34■□□□□ 0.53
Chd1P40201 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Chd1P40201 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chd1P40201 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Chd1P40201 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chd1P40201 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chd1P40201 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chd1P40201 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chd1P40201 Gm25226-201ENSMUST00000158198 123 ntBASIC18.33■□□□□ 0.52
Chd1P40201 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chd1P40201 Gm7627-201ENSMUST00000183205 999 ntBASIC18.33■□□□□ 0.52
Chd1P40201 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chd1P40201 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chd1P40201 AC154436.1-201ENSMUST00000227272 782 ntBASIC18.33■□□□□ 0.52
Chd1P40201 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chd1P40201 Gm29340-201ENSMUST00000188763 3854 ntBASIC18.33■□□□□ 0.52
Chd1P40201 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Chd1P40201 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chd1P40201 Gm43447-201ENSMUST00000198471 1535 ntBASIC18.33■□□□□ 0.52
Chd1P40201 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Chd1P40201 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chd1P40201 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chd1P40201 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chd1P40201 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chd1P40201 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chd1P40201 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd1P40201 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chd1P40201 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC18.32■□□□□ 0.52
Chd1P40201 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd1P40201 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd1P40201 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd1P40201 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Chd1P40201 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Chd1P40201 Gm24328-201ENSMUST00000175104 67 ntBASIC18.32■□□□□ 0.52
Chd1P40201 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chd1P40201 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd1P40201 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Chd1P40201 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd1P40201 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chd1P40201 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd1P40201 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd1P40201 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd1P40201 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd1P40201 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC18.32■□□□□ 0.52
Chd1P40201 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd1P40201 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd1P40201 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Chd1P40201 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC18.32■□□□□ 0.52
Chd1P40201 Gm13286-201ENSMUST00000117750 537 ntBASIC18.32■□□□□ 0.52
Chd1P40201 Gm15196-201ENSMUST00000121406 482 ntBASIC18.32■□□□□ 0.52
Chd1P40201 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chd1P40201 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC18.32■□□□□ 0.52
Chd1P40201 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Chd1P40201 Gm21778-201ENSMUST00000178779 471 ntBASIC18.32■□□□□ 0.52
Chd1P40201 Gm4895-201ENSMUST00000181646 1137 ntBASIC18.32■□□□□ 0.52
Chd1P40201 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd1P40201 Gm5599-201ENSMUST00000209602 788 ntBASIC18.32■□□□□ 0.52
Chd1P40201 CT573047.1-201ENSMUST00000223652 851 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms