Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Gm10434-201ENSMUST00000101158 471 ntBASIC12.36□□□□□ -0.43
HmgclP38060 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
HmgclP38060 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
HmgclP38060 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.36□□□□□ -0.43
HmgclP38060 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.36□□□□□ -0.43
HmgclP38060 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.36□□□□□ -0.43
HmgclP38060 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.36□□□□□ -0.43
HmgclP38060 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.36□□□□□ -0.43
HmgclP38060 Gm18054-201ENSMUST00000207539 555 ntBASIC12.36□□□□□ -0.43
HmgclP38060 Gm6007-201ENSMUST00000208170 823 ntBASIC12.36□□□□□ -0.43
HmgclP38060 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HmgclP38060 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.36□□□□□ -0.43
HmgclP38060 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HmgclP38060 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HmgclP38060 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HmgclP38060 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
HmgclP38060 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HmgclP38060 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
HmgclP38060 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HmgclP38060 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
HmgclP38060 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
HmgclP38060 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HmgclP38060 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HmgclP38060 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
HmgclP38060 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.36□□□□□ -0.43
HmgclP38060 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HmgclP38060 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
HmgclP38060 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HmgclP38060 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.36□□□□□ -0.43
HmgclP38060 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HmgclP38060 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HmgclP38060 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
HmgclP38060 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
HmgclP38060 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
HmgclP38060 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
HmgclP38060 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HmgclP38060 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
HmgclP38060 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
HmgclP38060 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.35□□□□□ -0.43
HmgclP38060 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.35□□□□□ -0.43
HmgclP38060 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
HmgclP38060 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.35□□□□□ -0.43
HmgclP38060 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
HmgclP38060 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
HmgclP38060 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
HmgclP38060 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.35□□□□□ -0.43
HmgclP38060 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HmgclP38060 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HmgclP38060 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
HmgclP38060 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HmgclP38060 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HmgclP38060 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HmgclP38060 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.35□□□□□ -0.43
HmgclP38060 Mospd4-201ENSMUST00000180618 576 ntBASIC12.35□□□□□ -0.43
HmgclP38060 Gm42627-201ENSMUST00000197347 224 ntBASIC12.35□□□□□ -0.43
HmgclP38060 Gm43118-201ENSMUST00000199149 775 ntBASIC12.35□□□□□ -0.43
HmgclP38060 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.35□□□□□ -0.43
HmgclP38060 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.35□□□□□ -0.43
HmgclP38060 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HmgclP38060 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HmgclP38060 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.35□□□□□ -0.43
HmgclP38060 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HmgclP38060 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HmgclP38060 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
HmgclP38060 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
HmgclP38060 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HmgclP38060 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
HmgclP38060 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HmgclP38060 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HmgclP38060 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HmgclP38060 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HmgclP38060 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
HmgclP38060 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.35□□□□□ -0.43
HmgclP38060 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HmgclP38060 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HmgclP38060 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
HmgclP38060 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
HmgclP38060 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HmgclP38060 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.34□□□□□ -0.43
HmgclP38060 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HmgclP38060 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HmgclP38060 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.34□□□□□ -0.43
HmgclP38060 Gm11793-201ENSMUST00000120433 981 ntBASIC12.34□□□□□ -0.43
HmgclP38060 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HmgclP38060 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.34□□□□□ -0.43
HmgclP38060 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.34□□□□□ -0.43
HmgclP38060 Gm23119-201ENSMUST00000158610 140 ntBASIC12.34□□□□□ -0.43
HmgclP38060 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HmgclP38060 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HmgclP38060 Gm10076-201ENSMUST00000073238 384 ntBASIC12.34□□□□□ -0.43
HmgclP38060 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
HmgclP38060 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
HmgclP38060 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HmgclP38060 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HmgclP38060 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
HmgclP38060 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HmgclP38060 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
HmgclP38060 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HmgclP38060 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.34□□□□□ -0.43
HmgclP38060 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms