Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm13263-201ENSMUST00000121271 838 ntBASIC14.04□□□□□ -0.16
Col2a1P28481 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col2a1P28481 Gm9550-201ENSMUST00000161130 862 ntBASIC14.04□□□□□ -0.16
Col2a1P28481 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col2a1P28481 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC14.04□□□□□ -0.16
Col2a1P28481 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC14.04□□□□□ -0.16
Col2a1P28481 AC121960.1-201ENSMUST00000227982 564 ntBASIC14.04□□□□□ -0.16
Col2a1P28481 Gm6781-201ENSMUST00000038304 1242 ntBASIC14.04□□□□□ -0.16
Col2a1P28481 Gm9785-201ENSMUST00000062642 1006 ntBASIC14.04□□□□□ -0.16
Col2a1P28481 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Col2a1P28481 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col2a1P28481 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col2a1P28481 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col2a1P28481 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Col2a1P28481 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.03□□□□□ -0.16
Col2a1P28481 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.03□□□□□ -0.16
Col2a1P28481 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col2a1P28481 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col2a1P28481 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Col2a1P28481 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col2a1P28481 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.03□□□□□ -0.16
Col2a1P28481 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col2a1P28481 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col2a1P28481 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.03□□□□□ -0.16
Col2a1P28481 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col2a1P28481 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col2a1P28481 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.03□□□□□ -0.16
Col2a1P28481 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col2a1P28481 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col2a1P28481 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Col2a1P28481 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col2a1P28481 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col2a1P28481 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Col2a1P28481 Gm13809-201ENSMUST00000117921 597 ntBASIC14.03□□□□□ -0.16
Col2a1P28481 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col2a1P28481 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC14.03□□□□□ -0.16
Col2a1P28481 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.03□□□□□ -0.16
Col2a1P28481 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC14.03□□□□□ -0.16
Col2a1P28481 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC14.03□□□□□ -0.16
Col2a1P28481 Gm9540-201ENSMUST00000188230 478 ntBASIC14.03□□□□□ -0.16
Col2a1P28481 Gm5714-201ENSMUST00000197343 566 ntBASIC14.03□□□□□ -0.16
Col2a1P28481 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC14.03□□□□□ -0.16
Col2a1P28481 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC14.03□□□□□ -0.16
Col2a1P28481 AC125486.1-201ENSMUST00000218701 320 ntBASIC14.03□□□□□ -0.16
Col2a1P28481 Gm29787-201ENSMUST00000222129 849 ntBASIC14.03□□□□□ -0.16
Col2a1P28481 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col2a1P28481 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col2a1P28481 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col2a1P28481 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col2a1P28481 Gm10288-201ENSMUST00000084614 537 ntBASIC14.03□□□□□ -0.16
Col2a1P28481 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col2a1P28481 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col2a1P28481 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col2a1P28481 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col2a1P28481 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col2a1P28481 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col2a1P28481 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col2a1P28481 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col2a1P28481 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.03□□□□□ -0.16
Col2a1P28481 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.02□□□□□ -0.16
Col2a1P28481 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col2a1P28481 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Col2a1P28481 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Col2a1P28481 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col2a1P28481 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col2a1P28481 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col2a1P28481 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col2a1P28481 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col2a1P28481 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col2a1P28481 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.02□□□□□ -0.16
Col2a1P28481 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Col2a1P28481 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col2a1P28481 Gm24891-201ENSMUST00000104391 136 ntBASIC14.02□□□□□ -0.16
Col2a1P28481 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Col2a1P28481 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col2a1P28481 Gm11660-201ENSMUST00000120955 412 ntBASIC14.02□□□□□ -0.16
Col2a1P28481 Gm13461-201ENSMUST00000120980 662 ntBASIC14.02□□□□□ -0.16
Col2a1P28481 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Col2a1P28481 Gm8815-201ENSMUST00000173809 620 ntBASIC14.02□□□□□ -0.16
Col2a1P28481 Gm4310-201ENSMUST00000177847 889 ntBASIC14.02□□□□□ -0.16
Col2a1P28481 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
Col2a1P28481 Gm10774-201ENSMUST00000188689 204 ntBASIC14.02□□□□□ -0.16
Col2a1P28481 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14.02□□□□□ -0.16
Col2a1P28481 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC14.02□□□□□ -0.16
Col2a1P28481 Gm6905-201ENSMUST00000205729 511 ntBASIC14.02□□□□□ -0.16
Col2a1P28481 CT009718.3-201ENSMUST00000221116 367 ntBASIC14.02□□□□□ -0.16
Col2a1P28481 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC14.02□□□□□ -0.16
Col2a1P28481 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col2a1P28481 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col2a1P28481 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col2a1P28481 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col2a1P28481 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col2a1P28481 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.02□□□□□ -0.17
Col2a1P28481 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col2a1P28481 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col2a1P28481 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Col2a1P28481 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col2a1P28481 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col2a1P28481 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col2a1P28481 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms