Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf9P20334 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf9P20334 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.46□□□□□ -0.74
Tnfrsf9P20334 Gm11405-201ENSMUST00000118689 1556 ntBASIC10.46□□□□□ -0.74
Tnfrsf9P20334 Gm18244-201ENSMUST00000219747 1566 ntBASIC10.46□□□□□ -0.74
Tnfrsf9P20334 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf9P20334 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf9P20334 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf9P20334 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf9P20334 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Tnfrsf9P20334 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Tnfrsf9P20334 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf9P20334 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf9P20334 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.46□□□□□ -0.74
Tnfrsf9P20334 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf9P20334 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf9P20334 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.46□□□□□ -0.74
Tnfrsf9P20334 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf9P20334 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf9P20334 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Gm27194-201ENSMUST00000175753 2936 ntBASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Gm22323-201ENSMUST00000103832 109 ntBASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Gm5687-201ENSMUST00000118252 640 ntBASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Gm5970-201ENSMUST00000131638 1216 ntBASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Gm7029-201ENSMUST00000173226 450 ntBASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Gm20854-201ENSMUST00000178889 1002 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Gm45574-201ENSMUST00000210921 331 ntBASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Gm8227-201ENSMUST00000223306 571 ntBASIC10.45□□□□□ -0.74
Tnfrsf9P20334 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.45□□□□□ -0.74
Tnfrsf9P20334 CT030704.2-201ENSMUST00000228887 494 ntBASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf9P20334 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Tnfrsf9P20334 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Tnfrsf9P20334 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.44□□□□□ -0.74
Tnfrsf9P20334 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Tnfrsf9P20334 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.44□□□□□ -0.74
Tnfrsf9P20334 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Tnfrsf9P20334 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Tnfrsf9P20334 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Tnfrsf9P20334 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Tnfrsf9P20334 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.44□□□□□ -0.74
Tnfrsf9P20334 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Tnfrsf9P20334 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Tnfrsf9P20334 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Tnfrsf9P20334 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Tnfrsf9P20334 Gm43289-201ENSMUST00000200537 1475 ntBASIC10.44□□□□□ -0.74
Tnfrsf9P20334 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Tnfrsf9P20334 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Tnfrsf9P20334 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Tnfrsf9P20334 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Tnfrsf9P20334 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC10.44□□□□□ -0.74
Tnfrsf9P20334 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC10.44□□□□□ -0.74
Tnfrsf9P20334 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Tnfrsf9P20334 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms