Protein–RNA interactions for Protein: P09092

Hoxa6, Homeobox protein Hox-A6, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa6P09092 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxa6P09092 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxa6P09092 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxa6P09092 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxa6P09092 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxa6P09092 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.86□□□□□ -0.67
Hoxa6P09092 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Hoxa6P09092 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Hoxa6P09092 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxa6P09092 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Hoxa6P09092 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxa6P09092 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxa6P09092 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Hoxa6P09092 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.86□□□□□ -0.67
Hoxa6P09092 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.86□□□□□ -0.67
Hoxa6P09092 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.86□□□□□ -0.67
Hoxa6P09092 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Hoxa6P09092 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxa6P09092 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxa6P09092 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxa6P09092 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxa6P09092 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Hoxa6P09092 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Hoxa6P09092 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.86□□□□□ -0.67
Hoxa6P09092 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxa6P09092 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC10.86□□□□□ -0.67
Hoxa6P09092 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxa6P09092 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxa6P09092 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxa6P09092 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC10.86□□□□□ -0.67
Hoxa6P09092 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.86□□□□□ -0.67
Hoxa6P09092 Gm9176-201ENSMUST00000219955 1120 ntBASIC10.86□□□□□ -0.67
Hoxa6P09092 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxa6P09092 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Hoxa6P09092 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Hoxa6P09092 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxa6P09092 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Hoxa6P09092 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxa6P09092 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Hoxa6P09092 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC10.86□□□□□ -0.67
Hoxa6P09092 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.86□□□□□ -0.67
Hoxa6P09092 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxa6P09092 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxa6P09092 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxa6P09092 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC10.86□□□□□ -0.67
Hoxa6P09092 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Hoxa6P09092 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxa6P09092 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxa6P09092 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxa6P09092 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxa6P09092 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.85□□□□□ -0.67
Hoxa6P09092 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 Gm15547-201ENSMUST00000122152 333 ntBASIC10.85□□□□□ -0.67
Hoxa6P09092 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.85□□□□□ -0.67
Hoxa6P09092 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Hoxa6P09092 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.85□□□□□ -0.67
Hoxa6P09092 Gm8885-201ENSMUST00000189382 598 ntBASIC10.85□□□□□ -0.67
Hoxa6P09092 Gm38317-201ENSMUST00000195564 343 ntBASIC10.85□□□□□ -0.67
Hoxa6P09092 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.85□□□□□ -0.67
Hoxa6P09092 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.85□□□□□ -0.67
Hoxa6P09092 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.85□□□□□ -0.67
Hoxa6P09092 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 Gm10782-202ENSMUST00000223775 1480 ntBASIC10.85□□□□□ -0.67
Hoxa6P09092 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Hoxa6P09092 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Hoxa6P09092 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hoxa6P09092 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms