Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Olfr582-201ENSMUST00000098212 960 ntBASIC12.35□□□□□ -0.43
Hoxa4P06798 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxa4P06798 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Hoxa4P06798 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxa4P06798 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxa4P06798 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Hoxa4P06798 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Hoxa4P06798 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxa4P06798 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxa4P06798 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxa4P06798 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxa4P06798 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Hoxa4P06798 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxa4P06798 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxa4P06798 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.35□□□□□ -0.43
Hoxa4P06798 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxa4P06798 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.34□□□□□ -0.43
Hoxa4P06798 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxa4P06798 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxa4P06798 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxa4P06798 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.34□□□□□ -0.43
Hoxa4P06798 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.34□□□□□ -0.43
Hoxa4P06798 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxa4P06798 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxa4P06798 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.34□□□□□ -0.43
Hoxa4P06798 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxa4P06798 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxa4P06798 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxa4P06798 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxa4P06798 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Hoxa4P06798 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxa4P06798 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.34□□□□□ -0.43
Hoxa4P06798 Gm12015-201ENSMUST00000117065 843 ntBASIC12.34□□□□□ -0.43
Hoxa4P06798 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.34□□□□□ -0.43
Hoxa4P06798 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.34□□□□□ -0.43
Hoxa4P06798 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.34□□□□□ -0.43
Hoxa4P06798 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxa4P06798 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxa4P06798 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxa4P06798 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxa4P06798 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxa4P06798 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.34□□□□□ -0.43
Hoxa4P06798 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxa4P06798 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.34□□□□□ -0.43
Hoxa4P06798 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.34□□□□□ -0.43
Hoxa4P06798 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxa4P06798 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxa4P06798 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxa4P06798 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxa4P06798 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxa4P06798 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxa4P06798 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.34□□□□□ -0.43
Hoxa4P06798 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.34□□□□□ -0.43
Hoxa4P06798 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxa4P06798 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxa4P06798 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Hoxa4P06798 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.33□□□□□ -0.43
Hoxa4P06798 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.33□□□□□ -0.44
Hoxa4P06798 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxa4P06798 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxa4P06798 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxa4P06798 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxa4P06798 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxa4P06798 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxa4P06798 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxa4P06798 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxa4P06798 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxa4P06798 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxa4P06798 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxa4P06798 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
Hoxa4P06798 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxa4P06798 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
Hoxa4P06798 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.33□□□□□ -0.44
Hoxa4P06798 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.33□□□□□ -0.44
Hoxa4P06798 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxa4P06798 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxa4P06798 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxa4P06798 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxa4P06798 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxa4P06798 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Hoxa4P06798 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxa4P06798 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Hoxa4P06798 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Hoxa4P06798 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.33□□□□□ -0.44
Hoxa4P06798 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxa4P06798 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxa4P06798 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxa4P06798 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Hoxa4P06798 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxa4P06798 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.33□□□□□ -0.44
Hoxa4P06798 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Hoxa4P06798 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Hoxa4P06798 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxa4P06798 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxa4P06798 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Hoxa4P06798 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxa4P06798 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Hoxa4P06798 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa4P06798 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa4P06798 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms