Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.73□□□□□ -0.53
IghmP01872 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.73□□□□□ -0.53
IghmP01872 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.73□□□□□ -0.53
IghmP01872 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
IghmP01872 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
IghmP01872 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
IghmP01872 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
IghmP01872 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
IghmP01872 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
IghmP01872 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
IghmP01872 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
IghmP01872 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
IghmP01872 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
IghmP01872 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
IghmP01872 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
IghmP01872 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
IghmP01872 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.73□□□□□ -0.53
IghmP01872 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
IghmP01872 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IghmP01872 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
IghmP01872 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.72□□□□□ -0.53
IghmP01872 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IghmP01872 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
IghmP01872 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
IghmP01872 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IghmP01872 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
IghmP01872 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
IghmP01872 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
IghmP01872 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IghmP01872 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
IghmP01872 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IghmP01872 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
IghmP01872 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.72□□□□□ -0.53
IghmP01872 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
IghmP01872 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IghmP01872 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
IghmP01872 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IghmP01872 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IghmP01872 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IghmP01872 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.72□□□□□ -0.53
IghmP01872 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.72□□□□□ -0.53
IghmP01872 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
IghmP01872 Gm1335-201ENSMUST00000121653 386 ntBASIC11.72□□□□□ -0.53
IghmP01872 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.72□□□□□ -0.53
IghmP01872 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
IghmP01872 Gm35960-201ENSMUST00000202712 767 ntBASIC11.72□□□□□ -0.53
IghmP01872 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IghmP01872 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IghmP01872 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
IghmP01872 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
IghmP01872 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.72□□□□□ -0.53
IghmP01872 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
IghmP01872 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
IghmP01872 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
IghmP01872 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
IghmP01872 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.72□□□□□ -0.53
IghmP01872 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.72□□□□□ -0.53
IghmP01872 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.72□□□□□ -0.53
IghmP01872 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
IghmP01872 Map1b-203ENSMUST00000223725 2669 ntBASIC11.72□□□□□ -0.53
IghmP01872 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.71□□□□□ -0.53
IghmP01872 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
IghmP01872 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
IghmP01872 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
IghmP01872 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
IghmP01872 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
IghmP01872 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
IghmP01872 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
IghmP01872 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
IghmP01872 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
IghmP01872 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
IghmP01872 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
IghmP01872 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
IghmP01872 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.71□□□□□ -0.53
IghmP01872 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
IghmP01872 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
IghmP01872 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
IghmP01872 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
IghmP01872 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
IghmP01872 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
IghmP01872 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.71□□□□□ -0.53
IghmP01872 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
IghmP01872 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
IghmP01872 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.71□□□□□ -0.53
IghmP01872 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.71□□□□□ -0.53
IghmP01872 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.71□□□□□ -0.53
IghmP01872 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
IghmP01872 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
IghmP01872 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
IghmP01872 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
IghmP01872 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
IghmP01872 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
IghmP01872 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
IghmP01872 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
IghmP01872 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
IghmP01872 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
IghmP01872 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
IghmP01872 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
IghmP01872 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
IghmP01872 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms