Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcn1O88704 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.04□□□□□ -0.48
Hcn1O88704 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.04□□□□□ -0.48
Hcn1O88704 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcn1O88704 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.04□□□□□ -0.48
Hcn1O88704 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcn1O88704 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hcn1O88704 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcn1O88704 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcn1O88704 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcn1O88704 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hcn1O88704 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Hcn1O88704 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.03□□□□□ -0.48
Hcn1O88704 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.03□□□□□ -0.48
Hcn1O88704 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcn1O88704 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcn1O88704 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcn1O88704 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcn1O88704 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.03□□□□□ -0.48
Hcn1O88704 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcn1O88704 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hcn1O88704 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcn1O88704 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcn1O88704 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcn1O88704 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcn1O88704 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hcn1O88704 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.03□□□□□ -0.48
Hcn1O88704 Gm11637-201ENSMUST00000120601 592 ntBASIC12.03□□□□□ -0.48
Hcn1O88704 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.03□□□□□ -0.48
Hcn1O88704 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hcn1O88704 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.03□□□□□ -0.48
Hcn1O88704 Gm37424-201ENSMUST00000191727 561 ntBASIC12.03□□□□□ -0.48
Hcn1O88704 Gm19931-201ENSMUST00000198920 368 ntBASIC12.03□□□□□ -0.48
Hcn1O88704 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcn1O88704 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hcn1O88704 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcn1O88704 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcn1O88704 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hcn1O88704 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.03□□□□□ -0.48
Hcn1O88704 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hcn1O88704 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hcn1O88704 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcn1O88704 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcn1O88704 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcn1O88704 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.03□□□□□ -0.48
Hcn1O88704 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcn1O88704 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hcn1O88704 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcn1O88704 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hcn1O88704 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.03□□□□□ -0.48
Hcn1O88704 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Hcn1O88704 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hcn1O88704 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Hcn1O88704 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.02□□□□□ -0.48
Hcn1O88704 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hcn1O88704 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hcn1O88704 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Hcn1O88704 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hcn1O88704 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Hcn1O88704 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hcn1O88704 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.02□□□□□ -0.48
Hcn1O88704 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hcn1O88704 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hcn1O88704 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Hcn1O88704 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hcn1O88704 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hcn1O88704 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hcn1O88704 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.02□□□□□ -0.49
Hcn1O88704 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hcn1O88704 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.02□□□□□ -0.49
Hcn1O88704 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Hcn1O88704 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.02□□□□□ -0.49
Hcn1O88704 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.02□□□□□ -0.49
Hcn1O88704 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.02□□□□□ -0.49
Hcn1O88704 Gm8062-201ENSMUST00000139696 444 ntBASIC12.02□□□□□ -0.49
Hcn1O88704 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hcn1O88704 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hcn1O88704 Gm27514-201ENSMUST00000183692 110 ntBASIC12.02□□□□□ -0.49
Hcn1O88704 Gm5370-201ENSMUST00000187187 574 ntBASIC12.02□□□□□ -0.49
Hcn1O88704 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.02□□□□□ -0.49
Hcn1O88704 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.02□□□□□ -0.49
Hcn1O88704 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hcn1O88704 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hcn1O88704 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hcn1O88704 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hcn1O88704 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hcn1O88704 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hcn1O88704 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hcn1O88704 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hcn1O88704 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.02□□□□□ -0.49
Hcn1O88704 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.02□□□□□ -0.49
Hcn1O88704 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hcn1O88704 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hcn1O88704 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hcn1O88704 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.02□□□□□ -0.49
Hcn1O88704 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.02□□□□□ -0.49
Hcn1O88704 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hcn1O88704 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hcn1O88704 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hcn1O88704 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms