Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim1O70400 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim1O70400 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim1O70400 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim1O70400 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Pdlim1O70400 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim1O70400 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim1O70400 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim1O70400 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim1O70400 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim1O70400 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Pdlim1O70400 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim1O70400 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim1O70400 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pdlim1O70400 Gm12241-201ENSMUST00000118330 726 ntBASIC12.42□□□□□ -0.42
Pdlim1O70400 Gm11222-201ENSMUST00000119005 738 ntBASIC12.42□□□□□ -0.42
Pdlim1O70400 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim1O70400 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pdlim1O70400 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pdlim1O70400 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.42□□□□□ -0.42
Pdlim1O70400 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.42□□□□□ -0.42
Pdlim1O70400 Gm2546-201ENSMUST00000182630 991 ntBASIC12.42□□□□□ -0.42
Pdlim1O70400 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.42□□□□□ -0.42
Pdlim1O70400 Gm18304-201ENSMUST00000189162 546 ntBASIC12.42□□□□□ -0.42
Pdlim1O70400 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pdlim1O70400 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.42□□□□□ -0.42
Pdlim1O70400 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.42□□□□□ -0.42
Pdlim1O70400 Gm9368-201ENSMUST00000219348 831 ntBASIC12.42□□□□□ -0.42
Pdlim1O70400 Gm10076-201ENSMUST00000073238 384 ntBASIC12.42□□□□□ -0.42
Pdlim1O70400 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim1O70400 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim1O70400 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.42□□□□□ -0.42
Pdlim1O70400 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim1O70400 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.42□□□□□ -0.42
Pdlim1O70400 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim1O70400 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Pdlim1O70400 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim1O70400 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim1O70400 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim1O70400 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.42□□□□□ -0.42
Pdlim1O70400 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.42□□□□□ -0.42
Pdlim1O70400 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Pdlim1O70400 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Pdlim1O70400 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim1O70400 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim1O70400 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Pdlim1O70400 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim1O70400 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim1O70400 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim1O70400 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim1O70400 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Pdlim1O70400 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Pdlim1O70400 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Pdlim1O70400 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim1O70400 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim1O70400 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Pdlim1O70400 Gm15370-201ENSMUST00000117158 253 ntBASIC12.41□□□□□ -0.42
Pdlim1O70400 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim1O70400 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.41□□□□□ -0.42
Pdlim1O70400 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.41□□□□□ -0.42
Pdlim1O70400 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.41□□□□□ -0.42
Pdlim1O70400 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.41□□□□□ -0.42
Pdlim1O70400 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.41□□□□□ -0.42
Pdlim1O70400 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pdlim1O70400 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pdlim1O70400 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pdlim1O70400 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim1O70400 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim1O70400 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim1O70400 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pdlim1O70400 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim1O70400 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.41□□□□□ -0.42
Pdlim1O70400 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pdlim1O70400 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.4□□□□□ -0.42
Pdlim1O70400 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.4□□□□□ -0.42
Pdlim1O70400 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim1O70400 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.42
Pdlim1O70400 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pdlim1O70400 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Pdlim1O70400 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim1O70400 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.4□□□□□ -0.42
Pdlim1O70400 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim1O70400 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim1O70400 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim1O70400 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim1O70400 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pdlim1O70400 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.4□□□□□ -0.42
Pdlim1O70400 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.4□□□□□ -0.42
Pdlim1O70400 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.4□□□□□ -0.42
Pdlim1O70400 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.4□□□□□ -0.42
Pdlim1O70400 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.4□□□□□ -0.42
Pdlim1O70400 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.4□□□□□ -0.42
Pdlim1O70400 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.4□□□□□ -0.42
Pdlim1O70400 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pdlim1O70400 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.4□□□□□ -0.42
Pdlim1O70400 Gm9022-201ENSMUST00000182482 992 ntBASIC12.4□□□□□ -0.42
Pdlim1O70400 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.4□□□□□ -0.42
Pdlim1O70400 Gm27243-201ENSMUST00000183964 521 ntBASIC12.4□□□□□ -0.42
Pdlim1O70400 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Pdlim1O70400 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms