Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh9F8VPK8 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh9F8VPK8 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh9F8VPK8 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh9F8VPK8 Gm6091-201ENSMUST00000098307 165 ntBASIC12.85□□□□□ -0.35
Pcdh9F8VPK8 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh9F8VPK8 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh9F8VPK8 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh9F8VPK8 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Pcdh9F8VPK8 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh9F8VPK8 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh9F8VPK8 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh9F8VPK8 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.85□□□□□ -0.35
Pcdh9F8VPK8 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh9F8VPK8 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Pcdh9F8VPK8 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh9F8VPK8 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Pcdh9F8VPK8 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Gm7029-201ENSMUST00000173226 450 ntBASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Gm8602-201ENSMUST00000184045 607 ntBASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Gm7561-201ENSMUST00000211203 886 ntBASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh9F8VPK8 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pcdh9F8VPK8 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pcdh9F8VPK8 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pcdh9F8VPK8 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh9F8VPK8 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.83□□□□□ -0.36
Pcdh9F8VPK8 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh9F8VPK8 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh9F8VPK8 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh9F8VPK8 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pcdh9F8VPK8 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Pcdh9F8VPK8 Gm4984-201ENSMUST00000115987 360 ntBASIC12.83□□□□□ -0.36
Pcdh9F8VPK8 Gm11964-201ENSMUST00000120982 444 ntBASIC12.83□□□□□ -0.36
Pcdh9F8VPK8 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.83□□□□□ -0.36
Pcdh9F8VPK8 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.83□□□□□ -0.36
Pcdh9F8VPK8 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh9F8VPK8 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh9F8VPK8 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.83□□□□□ -0.36
Pcdh9F8VPK8 Gm29649-201ENSMUST00000185649 419 ntBASIC12.83□□□□□ -0.36
Pcdh9F8VPK8 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh9F8VPK8 Gm42599-201ENSMUST00000201308 469 ntBASIC12.83□□□□□ -0.36
Pcdh9F8VPK8 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh9F8VPK8 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.83□□□□□ -0.36
Pcdh9F8VPK8 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Pcdh9F8VPK8 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh9F8VPK8 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh9F8VPK8 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pcdh9F8VPK8 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh9F8VPK8 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh9F8VPK8 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Pcdh9F8VPK8 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh9F8VPK8 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh9F8VPK8 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh9F8VPK8 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh9F8VPK8 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh9F8VPK8 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh9F8VPK8 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh9F8VPK8 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms