Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.61□□□□□ -0.71
Cpsf4lE9Q2N0 Gm2546-201ENSMUST00000182630 991 ntBASIC10.61□□□□□ -0.71
Cpsf4lE9Q2N0 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.61□□□□□ -0.71
Cpsf4lE9Q2N0 Gm29396-201ENSMUST00000185659 716 ntBASIC10.61□□□□□ -0.71
Cpsf4lE9Q2N0 Gm18304-201ENSMUST00000189162 546 ntBASIC10.61□□□□□ -0.71
Cpsf4lE9Q2N0 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.61□□□□□ -0.71
Cpsf4lE9Q2N0 Gm39404-201ENSMUST00000216350 313 ntBASIC10.61□□□□□ -0.71
Cpsf4lE9Q2N0 Gm7046-201ENSMUST00000221351 977 ntBASIC10.61□□□□□ -0.71
Cpsf4lE9Q2N0 AC125350.2-201ENSMUST00000224737 727 ntBASIC10.61□□□□□ -0.71
Cpsf4lE9Q2N0 Gm7399-201ENSMUST00000032395 858 ntBASIC10.61□□□□□ -0.71
Cpsf4lE9Q2N0 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Cpsf4lE9Q2N0 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cpsf4lE9Q2N0 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cpsf4lE9Q2N0 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cpsf4lE9Q2N0 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Cpsf4lE9Q2N0 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cpsf4lE9Q2N0 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cpsf4lE9Q2N0 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Cpsf4lE9Q2N0 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cpsf4lE9Q2N0 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cpsf4lE9Q2N0 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Cpsf4lE9Q2N0 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cpsf4lE9Q2N0 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.61□□□□□ -0.71
Cpsf4lE9Q2N0 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cpsf4lE9Q2N0 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cpsf4lE9Q2N0 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cpsf4lE9Q2N0 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.61□□□□□ -0.71
Cpsf4lE9Q2N0 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cpsf4lE9Q2N0 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cpsf4lE9Q2N0 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Gm27501-201ENSMUST00000183599 107 ntBASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Gm37201-201ENSMUST00000191845 523 ntBASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Gm6007-201ENSMUST00000208170 823 ntBASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Gm8227-201ENSMUST00000223306 571 ntBASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Gm10076-201ENSMUST00000073238 384 ntBASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cpsf4lE9Q2N0 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cpsf4lE9Q2N0 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms