Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm25562-201ENSMUST00000104608 133 ntBASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 Gm5714-201ENSMUST00000197343 566 ntBASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 Gm13201-201ENSMUST00000144031 600 ntTSL 3 BASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 AC124613.1-201ENSMUST00000198711 88 ntBASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 Gm5976-201ENSMUST00000180794 996 ntBASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 Gm43671-201ENSMUST00000200422 433 ntBASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 Gm5040-201ENSMUST00000218609 800 ntBASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 Tmem212-201ENSMUST00000058077 716 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 n-R5s71-201ENSMUST00000093668 119 ntBASIC12.15□□□□□ -0.46
Col6a3E9PWQ3 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Col6a3E9PWQ3 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col6a3E9PWQ3 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col6a3E9PWQ3 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col6a3E9PWQ3 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col6a3E9PWQ3 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col6a3E9PWQ3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Col6a3E9PWQ3 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Col6a3E9PWQ3 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a3E9PWQ3 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a3E9PWQ3 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a3E9PWQ3 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a3E9PWQ3 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Col6a3E9PWQ3 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Col6a3E9PWQ3 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a3E9PWQ3 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.14□□□□□ -0.47
Col6a3E9PWQ3 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a3E9PWQ3 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.14□□□□□ -0.47
Col6a3E9PWQ3 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a3E9PWQ3 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a3E9PWQ3 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a3E9PWQ3 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.14□□□□□ -0.47
Col6a3E9PWQ3 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a3E9PWQ3 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a3E9PWQ3 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a3E9PWQ3 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a3E9PWQ3 Ifna5-201ENSMUST00000102804 570 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Col6a3E9PWQ3 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.14□□□□□ -0.47
Col6a3E9PWQ3 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.14□□□□□ -0.47
Col6a3E9PWQ3 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC12.14□□□□□ -0.47
Col6a3E9PWQ3 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a3E9PWQ3 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Col6a3E9PWQ3 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a3E9PWQ3 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a3E9PWQ3 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a3E9PWQ3 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a3E9PWQ3 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.14□□□□□ -0.47
Col6a3E9PWQ3 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a3E9PWQ3 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a3E9PWQ3 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Col6a3E9PWQ3 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a3E9PWQ3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a3E9PWQ3 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 Ntf3-203ENSMUST00000204542 1343 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 Gm5291-201ENSMUST00000201965 899 ntBASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 AC125409.3-201ENSMUST00000223488 653 ntBASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a3E9PWQ3 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms