Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hfm1D3Z4R1 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hfm1D3Z4R1 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
Hfm1D3Z4R1 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Hfm1D3Z4R1 Gm23912-201ENSMUST00000104687 87 ntBASIC17.31■□□□□ 0.36
Hfm1D3Z4R1 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC17.31■□□□□ 0.36
Hfm1D3Z4R1 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hfm1D3Z4R1 Gm15744-201ENSMUST00000161734 213 ntBASIC17.31■□□□□ 0.36
Hfm1D3Z4R1 Gm38117-201ENSMUST00000194653 939 ntBASIC17.31■□□□□ 0.36
Hfm1D3Z4R1 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC17.31■□□□□ 0.36
Hfm1D3Z4R1 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC17.31■□□□□ 0.36
Hfm1D3Z4R1 Gm9111-201ENSMUST00000219394 709 ntBASIC17.31■□□□□ 0.36
Hfm1D3Z4R1 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Hfm1D3Z4R1 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hfm1D3Z4R1 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hfm1D3Z4R1 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Hfm1D3Z4R1 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Hfm1D3Z4R1 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hfm1D3Z4R1 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hfm1D3Z4R1 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hfm1D3Z4R1 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hfm1D3Z4R1 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hfm1D3Z4R1 Gm37859-201ENSMUST00000195529 2173 ntBASIC17.31■□□□□ 0.36
Hfm1D3Z4R1 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hfm1D3Z4R1 Gm37795-201ENSMUST00000194216 2459 ntBASIC17.31■□□□□ 0.36
Hfm1D3Z4R1 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Hfm1D3Z4R1 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hfm1D3Z4R1 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hfm1D3Z4R1 Gm44851-201ENSMUST00000205735 2309 ntBASIC17.31■□□□□ 0.36
Hfm1D3Z4R1 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hfm1D3Z4R1 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Hfm1D3Z4R1 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 Gm22877-201ENSMUST00000175451 105 ntBASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 Mir483-201ENSMUST00000093631 73 ntBASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 Gm37131-201ENSMUST00000192502 1561 ntBASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 Gm45546-201ENSMUST00000211053 2394 ntBASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 Gm7278-201ENSMUST00000119836 1401 ntBASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 CT009489.1-201ENSMUST00000227740 1893 ntBASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 Gm14942-201ENSMUST00000119642 336 ntBASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 Gm3150-201ENSMUST00000166418 204 ntBASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 Gm44506-201ENSMUST00000206278 965 ntBASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 Gm9661-201ENSMUST00000221611 1122 ntBASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hfm1D3Z4R1 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hfm1D3Z4R1 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hfm1D3Z4R1 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hfm1D3Z4R1 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Hfm1D3Z4R1 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hfm1D3Z4R1 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Hfm1D3Z4R1 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hfm1D3Z4R1 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hfm1D3Z4R1 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hfm1D3Z4R1 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hfm1D3Z4R1 Gm5385-201ENSMUST00000118988 1559 ntBASIC17.29■□□□□ 0.36
Hfm1D3Z4R1 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hfm1D3Z4R1 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC17.29■□□□□ 0.36
Hfm1D3Z4R1 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Hfm1D3Z4R1 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hfm1D3Z4R1 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hfm1D3Z4R1 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hfm1D3Z4R1 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC17.29■□□□□ 0.36
Hfm1D3Z4R1 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms