Protein–RNA interactions for Protein: B1AY40

Ssxb8, MCG1044712, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssxb8B1AY40 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ssxb8B1AY40 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssxb8B1AY40 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssxb8B1AY40 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssxb8B1AY40 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ssxb8B1AY40 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssxb8B1AY40 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ssxb8B1AY40 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssxb8B1AY40 Gm12928-201ENSMUST00000117115 573 ntBASIC12.12□□□□□ -0.47
Ssxb8B1AY40 Gm13123-201ENSMUST00000122173 492 ntBASIC12.12□□□□□ -0.47
Ssxb8B1AY40 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ssxb8B1AY40 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ssxb8B1AY40 Gm2495-201ENSMUST00000191160 466 ntBASIC12.12□□□□□ -0.47
Ssxb8B1AY40 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.12□□□□□ -0.47
Ssxb8B1AY40 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Ssxb8B1AY40 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.12□□□□□ -0.47
Ssxb8B1AY40 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.12□□□□□ -0.47
Ssxb8B1AY40 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssxb8B1AY40 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ssxb8B1AY40 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssxb8B1AY40 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ssxb8B1AY40 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.12□□□□□ -0.47
Ssxb8B1AY40 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssxb8B1AY40 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.12□□□□□ -0.47
Ssxb8B1AY40 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssxb8B1AY40 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssxb8B1AY40 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssxb8B1AY40 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssxb8B1AY40 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssxb8B1AY40 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssxb8B1AY40 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssxb8B1AY40 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ssxb8B1AY40 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssxb8B1AY40 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ssxb8B1AY40 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Gm8099-201ENSMUST00000200510 742 ntBASIC12.11□□□□□ -0.47
Ssxb8B1AY40 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.11□□□□□ -0.47
Ssxb8B1AY40 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssxb8B1AY40 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.1□□□□□ -0.47
Ssxb8B1AY40 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.1□□□□□ -0.47
Ssxb8B1AY40 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ssxb8B1AY40 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssxb8B1AY40 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ssxb8B1AY40 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssxb8B1AY40 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.1□□□□□ -0.47
Ssxb8B1AY40 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssxb8B1AY40 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Ssxb8B1AY40 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.1□□□□□ -0.47
Ssxb8B1AY40 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Ssxb8B1AY40 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.1□□□□□ -0.47
Ssxb8B1AY40 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.1□□□□□ -0.47
Ssxb8B1AY40 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ssxb8B1AY40 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.1□□□□□ -0.47
Ssxb8B1AY40 Gm14057-201ENSMUST00000120631 482 ntBASIC12.1□□□□□ -0.47
Ssxb8B1AY40 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ssxb8B1AY40 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssxb8B1AY40 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ssxb8B1AY40 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.1□□□□□ -0.47
Ssxb8B1AY40 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.1□□□□□ -0.47
Ssxb8B1AY40 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms