Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cfap99A0A140LIX9 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 AC241621.2-201ENSMUST00000223991 2151 ntBASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Gm4366-201ENSMUST00000201488 1342 ntBASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Gm11531-201ENSMUST00000117614 555 ntBASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Gm11930-201ENSMUST00000117788 190 ntBASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Gm11439-201ENSMUST00000118598 409 ntBASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Gm14277-201ENSMUST00000121195 360 ntBASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Gm22902-201ENSMUST00000158488 302 ntBASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Gm27341-201ENSMUST00000183570 106 ntBASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 AC167669.2-201ENSMUST00000224417 1620 ntBASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Gm44775-201ENSMUST00000207266 1456 ntBASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cfap99A0A140LIX9 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Snord83b-201ENSMUST00000104546 94 ntBASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Gm5950-201ENSMUST00000213337 772 ntBASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Gm9004-201ENSMUST00000218739 1222 ntBASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Abhd11os-203ENSMUST00000222613 363 ntBASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cfap99A0A140LIX9 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cfap99A0A140LIX9 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Cfap99A0A140LIX9 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.99□□□□□ -0.01
Cfap99A0A140LIX9 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
Cfap99A0A140LIX9 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.99□□□□□ -0.01
Cfap99A0A140LIX9 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cfap99A0A140LIX9 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Cfap99A0A140LIX9 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cfap99A0A140LIX9 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cfap99A0A140LIX9 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Cfap99A0A140LIX9 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.99□□□□□ -0.01
Cfap99A0A140LIX9 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms