Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Gm44292-201ENSMUST00000205194 2364 ntBASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Gm43858-201ENSMUST00000199418 1778 ntBASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Gm17150-201ENSMUST00000165577 381 ntBASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Gm27682-201ENSMUST00000183930 110 ntBASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Gm29127-201ENSMUST00000188304 517 ntBASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Gm32025-201ENSMUST00000217960 307 ntBASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 AC069562.3-201ENSMUST00000225387 587 ntBASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Gm10339-203ENSMUST00000225409 1671 ntBASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Gm37391-201ENSMUST00000194891 2318 ntBASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Gm43463-201ENSMUST00000195967 1803 ntBASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Gm13394-201ENSMUST00000121658 1000 ntBASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Gm2639-201ENSMUST00000156881 1297 ntBASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Gm8835-201ENSMUST00000173096 1169 ntBASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC9.1□□□□□ -0.95
Trav9n-2A0A0G2JDP3 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms