Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RpgrQ9R0X5 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RpgrQ9R0X5 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.81□□□□□ -0.36
RpgrQ9R0X5 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RpgrQ9R0X5 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RpgrQ9R0X5 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RpgrQ9R0X5 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RpgrQ9R0X5 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RpgrQ9R0X5 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Proscos-202ENSMUST00000178990 666 ntBASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Gm8652-201ENSMUST00000181363 964 ntBASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RpgrQ9R0X5 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RpgrQ9R0X5 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
RpgrQ9R0X5 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RpgrQ9R0X5 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
RpgrQ9R0X5 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Gm11637-201ENSMUST00000120601 592 ntBASIC12.79□□□□□ -0.36
RpgrQ9R0X5 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
RpgrQ9R0X5 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RpgrQ9R0X5 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms