Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC14.64□□□□□ -0.07
Scn11aQ9R053 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scn11aQ9R053 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scn11aQ9R053 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Scn11aQ9R053 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Scn11aQ9R053 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Scn11aQ9R053 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scn11aQ9R053 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scn11aQ9R053 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scn11aQ9R053 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.64□□□□□ -0.07
Scn11aQ9R053 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.64□□□□□ -0.07
Scn11aQ9R053 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scn11aQ9R053 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Scn11aQ9R053 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Scn11aQ9R053 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scn11aQ9R053 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Scn11aQ9R053 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scn11aQ9R053 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.63□□□□□ -0.07
Scn11aQ9R053 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scn11aQ9R053 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Scn11aQ9R053 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scn11aQ9R053 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scn11aQ9R053 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scn11aQ9R053 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scn11aQ9R053 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scn11aQ9R053 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.63□□□□□ -0.07
Scn11aQ9R053 Gm16166-201ENSMUST00000118291 787 ntBASIC14.63□□□□□ -0.07
Scn11aQ9R053 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Scn11aQ9R053 Gm5706-201ENSMUST00000181525 993 ntBASIC14.63□□□□□ -0.07
Scn11aQ9R053 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC14.63□□□□□ -0.07
Scn11aQ9R053 Gm44124-201ENSMUST00000204159 472 ntBASIC14.63□□□□□ -0.07
Scn11aQ9R053 CT485607.1-201ENSMUST00000216100 85 ntBASIC14.63□□□□□ -0.07
Scn11aQ9R053 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Scn11aQ9R053 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Scn11aQ9R053 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scn11aQ9R053 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scn11aQ9R053 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Scn11aQ9R053 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scn11aQ9R053 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Scn11aQ9R053 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.63□□□□□ -0.07
Scn11aQ9R053 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.63□□□□□ -0.07
Scn11aQ9R053 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scn11aQ9R053 Gm18782-201ENSMUST00000209023 1399 ntBASIC14.63□□□□□ -0.07
Scn11aQ9R053 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scn11aQ9R053 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scn11aQ9R053 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Scn11aQ9R053 Mir7677-201ENSMUST00000184226 67 ntBASIC14.62□□□□□ -0.07
Scn11aQ9R053 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC14.62□□□□□ -0.07
Scn11aQ9R053 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC14.62□□□□□ -0.07
Scn11aQ9R053 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC14.62□□□□□ -0.07
Scn11aQ9R053 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Scn11aQ9R053 Gm4157-201ENSMUST00000211647 679 ntBASIC14.62□□□□□ -0.07
Scn11aQ9R053 AC151275.1-201ENSMUST00000224870 585 ntBASIC14.62□□□□□ -0.07
Scn11aQ9R053 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scn11aQ9R053 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scn11aQ9R053 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scn11aQ9R053 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Scn11aQ9R053 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Scn11aQ9R053 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scn11aQ9R053 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scn11aQ9R053 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Scn11aQ9R053 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scn11aQ9R053 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scn11aQ9R053 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scn11aQ9R053 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scn11aQ9R053 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Scn11aQ9R053 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scn11aQ9R053 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Scn11aQ9R053 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Scn11aQ9R053 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scn11aQ9R053 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Scn11aQ9R053 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Scn11aQ9R053 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scn11aQ9R053 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scn11aQ9R053 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
Scn11aQ9R053 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Scn11aQ9R053 Gm28686-201ENSMUST00000187404 609 ntBASIC14.62□□□□□ -0.07
Scn11aQ9R053 Gm37028-201ENSMUST00000194276 107 ntBASIC14.62□□□□□ -0.07
Scn11aQ9R053 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.62□□□□□ -0.07
Scn11aQ9R053 AC129219.2-201ENSMUST00000224324 701 ntBASIC14.62□□□□□ -0.07
Scn11aQ9R053 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scn11aQ9R053 Gm10288-201ENSMUST00000084614 537 ntBASIC14.62□□□□□ -0.07
Scn11aQ9R053 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scn11aQ9R053 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Scn11aQ9R053 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scn11aQ9R053 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scn11aQ9R053 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scn11aQ9R053 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Scn11aQ9R053 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Scn11aQ9R053 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Scn11aQ9R053 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scn11aQ9R053 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scn11aQ9R053 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scn11aQ9R053 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scn11aQ9R053 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Scn11aQ9R053 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scn11aQ9R053 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Scn11aQ9R053 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Scn11aQ9R053 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Scn11aQ9R053 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms