Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Gm16479-201ENSMUST00000121706 932 ntBASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Gm2231-201ENSMUST00000125661 612 ntBASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Gm4271-201ENSMUST00000174444 973 ntBASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Gm45784-201ENSMUST00000188360 142 ntBASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.34□□□□□ -0.59
Sec61a2Q9JLR1 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Gm17208-201ENSMUST00000168388 535 ntBASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Gm37497-201ENSMUST00000195830 798 ntBASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 AC153937.1-201ENSMUST00000218734 412 ntBASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sec61a2Q9JLR1 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Sec61a2Q9JLR1 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sec61a2Q9JLR1 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Sec61a2Q9JLR1 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Sec61a2Q9JLR1 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sec61a2Q9JLR1 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sec61a2Q9JLR1 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.32□□□□□ -0.6
Sec61a2Q9JLR1 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sec61a2Q9JLR1 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sec61a2Q9JLR1 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sec61a2Q9JLR1 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sec61a2Q9JLR1 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sec61a2Q9JLR1 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sec61a2Q9JLR1 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms