Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Gm12314-201ENSMUST00000118104 538 ntBASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Gm9630-201ENSMUST00000178304 885 ntBASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Gm9022-201ENSMUST00000182482 992 ntBASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Gm29396-201ENSMUST00000185659 716 ntBASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Gm43630-201ENSMUST00000201550 776 ntBASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Olfr284-202ENSMUST00000206647 966 ntBASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Gm6013-201ENSMUST00000212264 699 ntBASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Gm39404-201ENSMUST00000216350 313 ntBASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Gm7046-201ENSMUST00000221351 977 ntBASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Ldb3Q9JKS4 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Gm10434-201ENSMUST00000101158 471 ntBASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Gm12058-201ENSMUST00000118614 437 ntBASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ldb3Q9JKS4 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.36□□□□□ -0.59
Ldb3Q9JKS4 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ldb3Q9JKS4 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.36□□□□□ -0.59
Ldb3Q9JKS4 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Ldb3Q9JKS4 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ldb3Q9JKS4 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ldb3Q9JKS4 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.36□□□□□ -0.59
Ldb3Q9JKS4 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Ldb3Q9JKS4 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ldb3Q9JKS4 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ldb3Q9JKS4 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ldb3Q9JKS4 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ldb3Q9JKS4 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.36□□□□□ -0.59
Ldb3Q9JKS4 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ldb3Q9JKS4 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.36□□□□□ -0.59
Ldb3Q9JKS4 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ldb3Q9JKS4 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.36□□□□□ -0.59
Ldb3Q9JKS4 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms