Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Gm12516-201ENSMUST00000120819 385 ntBASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-4Q9EQM3 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-4Q9EQM3 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Nkx2-4Q9EQM3 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-4Q9EQM3 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Nkx2-4Q9EQM3 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Nkx2-4Q9EQM3 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-4Q9EQM3 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.84□□□□□ -0.35
Nkx2-4Q9EQM3 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-4Q9EQM3 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-4Q9EQM3 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-4Q9EQM3 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.84□□□□□ -0.35
Nkx2-4Q9EQM3 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.84□□□□□ -0.35
Nkx2-4Q9EQM3 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.84□□□□□ -0.35
Nkx2-4Q9EQM3 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-4Q9EQM3 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.84□□□□□ -0.35
Nkx2-4Q9EQM3 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.84□□□□□ -0.35
Nkx2-4Q9EQM3 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.84□□□□□ -0.35
Nkx2-4Q9EQM3 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-4Q9EQM3 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-4Q9EQM3 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-4Q9EQM3 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.84□□□□□ -0.35
Nkx2-4Q9EQM3 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-4Q9EQM3 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-4Q9EQM3 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-4Q9EQM3 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx2-4Q9EQM3 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nkx2-4Q9EQM3 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nkx2-4Q9EQM3 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Nkx2-4Q9EQM3 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Nkx2-4Q9EQM3 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.83□□□□□ -0.35
Nkx2-4Q9EQM3 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Nkx2-4Q9EQM3 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.83□□□□□ -0.35
Nkx2-4Q9EQM3 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms