Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Gm8805-201ENSMUST00000117848 313 ntBASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Gm27331-201ENSMUST00000183705 60 ntBASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ssu72Q9CY97 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Rmrp-201ENSMUST00000157463 271 ntBASIC12.43□□□□□ -0.42
Ssu72Q9CY97 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Gm2495-201ENSMUST00000191160 466 ntBASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms