Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Snora73b-201ENSMUST00000083419 205 ntBASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Gm25517-201ENSMUST00000083865 134 ntBASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Gm12857-201ENSMUST00000117678 592 ntBASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Gm9022-201ENSMUST00000182482 992 ntBASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Gm27530-201ENSMUST00000184096 98 ntBASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Gm2965-201ENSMUST00000198365 343 ntBASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Gm17831-201ENSMUST00000205579 900 ntBASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldnd1Q9CQX5 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldnd1Q9CQX5 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms