Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gtf2a1Q99PM3 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gtf2a1Q99PM3 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gtf2a1Q99PM3 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Gtf2a1Q99PM3 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gtf2a1Q99PM3 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gtf2a1Q99PM3 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Gtf2a1Q99PM3 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gtf2a1Q99PM3 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Gtf2a1Q99PM3 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Gtf2a1Q99PM3 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Gm5703-201ENSMUST00000186658 3973 ntBASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Gm25016-201ENSMUST00000158399 131 ntBASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Itga7-202ENSMUST00000218290 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2a1Q99PM3 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gtf2a1Q99PM3 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gtf2a1Q99PM3 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms