Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Mir7221-201ENSMUST00000184009 72 ntBASIC12.43□□□□□ -0.42
Cdh23Q99PF4 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Gm10169-201ENSMUST00000121822 348 ntBASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Gm29763-201ENSMUST00000205306 616 ntBASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Gm3283-201ENSMUST00000199319 1350 ntBASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Gm11663-201ENSMUST00000117888 290 ntBASIC12.42□□□□□ -0.42
Cdh23Q99PF4 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Gm8451-201ENSMUST00000170338 447 ntBASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Gm8756-201ENSMUST00000183250 929 ntBASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Gm8342-201ENSMUST00000209839 757 ntBASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Gm7536-201ENSMUST00000077389 444 ntBASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Gm5453-201ENSMUST00000080866 447 ntBASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Gm22146-201ENSMUST00000157397 288 ntBASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Gm22846-201ENSMUST00000157706 270 ntBASIC12.42□□□□□ -0.42
Cdh23Q99PF4 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Gm5513-201ENSMUST00000072982 1218 ntBASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdh23Q99PF4 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.41□□□□□ -0.42
Cdh23Q99PF4 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh23Q99PF4 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Cdh23Q99PF4 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.41□□□□□ -0.42
Cdh23Q99PF4 Gm13351-201ENSMUST00000118087 414 ntBASIC12.41□□□□□ -0.42
Cdh23Q99PF4 Gm17214-201ENSMUST00000164501 541 ntBASIC12.41□□□□□ -0.42
Cdh23Q99PF4 Gm17192-201ENSMUST00000169031 511 ntBASIC12.41□□□□□ -0.42
Cdh23Q99PF4 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh23Q99PF4 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.41□□□□□ -0.42
Cdh23Q99PF4 Gm18561-201ENSMUST00000206027 804 ntBASIC12.41□□□□□ -0.42
Cdh23Q99PF4 Gm45481-201ENSMUST00000209717 877 ntBASIC12.41□□□□□ -0.42
Cdh23Q99PF4 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.41□□□□□ -0.42
Cdh23Q99PF4 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.41□□□□□ -0.42
Cdh23Q99PF4 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Cdh23Q99PF4 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh23Q99PF4 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh23Q99PF4 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC12.41□□□□□ -0.42
Cdh23Q99PF4 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh23Q99PF4 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh23Q99PF4 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
Cdh23Q99PF4 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Cdh23Q99PF4 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cdh23Q99PF4 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh23Q99PF4 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms