Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Gm13123-201ENSMUST00000122173 492 ntBASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.83□□□□□ -0.52
Nkd1Q99MH6 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkd1Q99MH6 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Gm37922-201ENSMUST00000195596 455 ntBASIC11.83□□□□□ -0.52
Nkd1Q99MH6 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.83□□□□□ -0.52
Nkd1Q99MH6 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.83□□□□□ -0.52
Nkd1Q99MH6 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.83□□□□□ -0.52
Nkd1Q99MH6 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Gm26035-201ENSMUST00000083065 308 ntBASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkd1Q99MH6 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Gm14921-201ENSMUST00000118643 908 ntBASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Gm11434-201ENSMUST00000122379 629 ntBASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Gm23363-201ENSMUST00000175024 79 ntBASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Gm8515-201ENSMUST00000194852 576 ntBASIC11.82□□□□□ -0.52
Nkd1Q99MH6 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkd1Q99MH6 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkd1Q99MH6 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkd1Q99MH6 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Nkd1Q99MH6 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Nkd1Q99MH6 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkd1Q99MH6 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkd1Q99MH6 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkd1Q99MH6 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkd1Q99MH6 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkd1Q99MH6 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms