Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 Gm27023-201ENSMUST00000182372 285 ntBASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 Gm6082-201ENSMUST00000215204 454 ntBASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 Gm14999-201ENSMUST00000121039 624 ntBASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 Rmrp-201ENSMUST00000157463 271 ntBASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 Gm4857-201ENSMUST00000192718 785 ntBASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 Gm39404-201ENSMUST00000216350 313 ntBASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 Pck2-205ENSMUST00000226352 2784 ntBASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.04□□□□□ -0.32
Lysmd3Q99LE3 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd3Q99LE3 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.02□□□□□ -0.32
Lysmd3Q99LE3 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lysmd3Q99LE3 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms