Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Lims1Q99JW4 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lims1Q99JW4 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lims1Q99JW4 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Lims1Q99JW4 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.45□□□□□ -0.58
Lims1Q99JW4 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lims1Q99JW4 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.45□□□□□ -0.58
Lims1Q99JW4 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.45□□□□□ -0.58
Lims1Q99JW4 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lims1Q99JW4 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.45□□□□□ -0.58
Lims1Q99JW4 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.45□□□□□ -0.58
Lims1Q99JW4 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Lims1Q99JW4 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.45□□□□□ -0.58
Lims1Q99JW4 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lims1Q99JW4 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lims1Q99JW4 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lims1Q99JW4 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lims1Q99JW4 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lims1Q99JW4 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lims1Q99JW4 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lims1Q99JW4 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lims1Q99JW4 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Lims1Q99JW4 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.45□□□□□ -0.58
Lims1Q99JW4 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lims1Q99JW4 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lims1Q99JW4 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lims1Q99JW4 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Lims1Q99JW4 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lims1Q99JW4 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lims1Q99JW4 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lims1Q99JW4 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lims1Q99JW4 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.44□□□□□ -0.58
Lims1Q99JW4 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lims1Q99JW4 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lims1Q99JW4 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lims1Q99JW4 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lims1Q99JW4 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lims1Q99JW4 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lims1Q99JW4 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lims1Q99JW4 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lims1Q99JW4 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.44□□□□□ -0.58
Lims1Q99JW4 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lims1Q99JW4 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lims1Q99JW4 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.44□□□□□ -0.58
Lims1Q99JW4 Gm13369-201ENSMUST00000119442 987 ntBASIC11.44□□□□□ -0.58
Lims1Q99JW4 Gm11964-201ENSMUST00000120982 444 ntBASIC11.44□□□□□ -0.58
Lims1Q99JW4 Gm11918-201ENSMUST00000121660 179 ntBASIC11.44□□□□□ -0.58
Lims1Q99JW4 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Lims1Q99JW4 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lims1Q99JW4 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lims1Q99JW4 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lims1Q99JW4 Gm26185-201ENSMUST00000157692 266 ntBASIC11.44□□□□□ -0.58
Lims1Q99JW4 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Lims1Q99JW4 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lims1Q99JW4 Gm9908-201ENSMUST00000211534 448 ntBASIC11.44□□□□□ -0.58
Lims1Q99JW4 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.44□□□□□ -0.58
Lims1Q99JW4 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lims1Q99JW4 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lims1Q99JW4 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lims1Q99JW4 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Lims1Q99JW4 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lims1Q99JW4 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lims1Q99JW4 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lims1Q99JW4 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lims1Q99JW4 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lims1Q99JW4 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lims1Q99JW4 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lims1Q99JW4 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lims1Q99JW4 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lims1Q99JW4 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lims1Q99JW4 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.44□□□□□ -0.58
Lims1Q99JW4 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lims1Q99JW4 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Lims1Q99JW4 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.43□□□□□ -0.58
Lims1Q99JW4 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.43□□□□□ -0.58
Lims1Q99JW4 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Gm12363-201ENSMUST00000122250 668 ntBASIC11.43□□□□□ -0.58
Lims1Q99JW4 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lims1Q99JW4 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms