Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb20Q91XZ9 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb20Q91XZ9 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb20Q91XZ9 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb20Q91XZ9 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb20Q91XZ9 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb20Q91XZ9 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb20Q91XZ9 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.71□□□□□ -0.37
Pcdhb20Q91XZ9 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb20Q91XZ9 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb20Q91XZ9 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb20Q91XZ9 Trbv2-201ENSMUST00000103263 560 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Pcdhb20Q91XZ9 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Pcdhb20Q91XZ9 Mir874-201ENSMUST00000104769 76 ntBASIC12.71□□□□□ -0.37
Pcdhb20Q91XZ9 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb20Q91XZ9 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb20Q91XZ9 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Pcdhb20Q91XZ9 Gm13226-201ENSMUST00000117838 404 ntBASIC12.71□□□□□ -0.37
Pcdhb20Q91XZ9 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhb20Q91XZ9 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Pcdhb20Q91XZ9 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb20Q91XZ9 Gm16958-202ENSMUST00000181792 830 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb20Q91XZ9 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb20Q91XZ9 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.71□□□□□ -0.37
Pcdhb20Q91XZ9 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb20Q91XZ9 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.71□□□□□ -0.37
Pcdhb20Q91XZ9 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhb20Q91XZ9 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC12.71□□□□□ -0.37
Pcdhb20Q91XZ9 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.71□□□□□ -0.37
Pcdhb20Q91XZ9 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb20Q91XZ9 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb20Q91XZ9 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb20Q91XZ9 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb20Q91XZ9 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb20Q91XZ9 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb20Q91XZ9 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.71□□□□□ -0.38
Pcdhb20Q91XZ9 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb20Q91XZ9 Gm11868-201ENSMUST00000121594 1478 ntBASIC12.71□□□□□ -0.38
Pcdhb20Q91XZ9 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb20Q91XZ9 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb20Q91XZ9 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Pcdhb20Q91XZ9 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Gm22032-201ENSMUST00000116946 116 ntBASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Gm15754-201ENSMUST00000119191 478 ntBASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Gm12384-201ENSMUST00000119228 919 ntBASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Gm12269-201ENSMUST00000122273 717 ntBASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Gm17219-201ENSMUST00000168439 593 ntBASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Gm27817-201ENSMUST00000184302 233 ntBASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Gm36994-201ENSMUST00000192941 492 ntBASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 AY702102-202ENSMUST00000194651 1173 ntBASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Gm43629-201ENSMUST00000201782 704 ntBASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Gm43905-201ENSMUST00000204516 204 ntBASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 AC121804.1-201ENSMUST00000221016 394 ntBASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Akap7-202ENSMUST00000095779 919 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb20Q91XZ9 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms