Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atp2a1Q8R429 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atp2a1Q8R429 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
Atp2a1Q8R429 Gm15703-201ENSMUST00000120250 880 ntBASIC14.04□□□□□ -0.16
Atp2a1Q8R429 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.04□□□□□ -0.16
Atp2a1Q8R429 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.04□□□□□ -0.16
Atp2a1Q8R429 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Atp2a1Q8R429 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
Atp2a1Q8R429 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atp2a1Q8R429 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Atp2a1Q8R429 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atp2a1Q8R429 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Atp2a1Q8R429 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atp2a1Q8R429 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Atp2a1Q8R429 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atp2a1Q8R429 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Atp2a1Q8R429 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Atp2a1Q8R429 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atp2a1Q8R429 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Atp2a1Q8R429 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Atp2a1Q8R429 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.04□□□□□ -0.16
Atp2a1Q8R429 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atp2a1Q8R429 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.04□□□□□ -0.16
Atp2a1Q8R429 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atp2a1Q8R429 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Gm11439-201ENSMUST00000118598 409 ntBASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Gm14999-201ENSMUST00000121039 624 ntBASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Gm14832-201ENSMUST00000121289 322 ntBASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Gm24845-201ENSMUST00000158034 109 ntBASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Gm26361-201ENSMUST00000158868 186 ntBASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Mir5132-201ENSMUST00000175166 71 ntBASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Rps4l-202ENSMUST00000204242 789 ntBASIC14.03□□□□□ -0.16
Atp2a1Q8R429 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atp2a1Q8R429 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC14.02□□□□□ -0.16
Atp2a1Q8R429 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atp2a1Q8R429 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atp2a1Q8R429 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atp2a1Q8R429 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.02□□□□□ -0.16
Atp2a1Q8R429 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atp2a1Q8R429 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atp2a1Q8R429 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atp2a1Q8R429 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atp2a1Q8R429 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atp2a1Q8R429 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atp2a1Q8R429 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atp2a1Q8R429 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atp2a1Q8R429 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Atp2a1Q8R429 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atp2a1Q8R429 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atp2a1Q8R429 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Atp2a1Q8R429 Gm4909-201ENSMUST00000118749 794 ntBASIC14.02□□□□□ -0.17
Atp2a1Q8R429 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC14.02□□□□□ -0.17
Atp2a1Q8R429 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Atp2a1Q8R429 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Atp2a1Q8R429 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms