Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.7□□□□□ -0.38
Slf1Q8R3P9 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Slf1Q8R3P9 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slf1Q8R3P9 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slf1Q8R3P9 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Slf1Q8R3P9 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slf1Q8R3P9 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Slf1Q8R3P9 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slf1Q8R3P9 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Slf1Q8R3P9 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slf1Q8R3P9 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Gm12403-201ENSMUST00000121384 959 ntBASIC12.69□□□□□ -0.38
Slf1Q8R3P9 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slf1Q8R3P9 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Auts2-212ENSMUST00000178555 309 ntBASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Gm5354-201ENSMUST00000182417 973 ntBASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Gm7730-201ENSMUST00000212486 454 ntBASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Gm6218-201ENSMUST00000219812 628 ntBASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Slf1Q8R3P9 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slf1Q8R3P9 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slf1Q8R3P9 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Slf1Q8R3P9 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slf1Q8R3P9 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Slf1Q8R3P9 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slf1Q8R3P9 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slf1Q8R3P9 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Slf1Q8R3P9 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms