Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Cchcr1Q8K2I2 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cchcr1Q8K2I2 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cchcr1Q8K2I2 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Cchcr1Q8K2I2 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cchcr1Q8K2I2 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cchcr1Q8K2I2 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cchcr1Q8K2I2 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cchcr1Q8K2I2 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.85□□□□□ -0.03
Cchcr1Q8K2I2 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.85□□□□□ -0.03
Cchcr1Q8K2I2 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cchcr1Q8K2I2 Rmrp-201ENSMUST00000157463 271 ntBASIC14.85□□□□□ -0.03
Cchcr1Q8K2I2 Gm7029-201ENSMUST00000173226 450 ntBASIC14.85□□□□□ -0.03
Cchcr1Q8K2I2 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cchcr1Q8K2I2 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.85□□□□□ -0.03
Cchcr1Q8K2I2 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cchcr1Q8K2I2 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC14.85□□□□□ -0.03
Cchcr1Q8K2I2 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.85□□□□□ -0.03
Cchcr1Q8K2I2 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cchcr1Q8K2I2 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cchcr1Q8K2I2 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cchcr1Q8K2I2 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cchcr1Q8K2I2 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cchcr1Q8K2I2 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cchcr1Q8K2I2 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Cchcr1Q8K2I2 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 Gm11478-201ENSMUST00000117851 599 ntBASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cchcr1Q8K2I2 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14.83□□□□□ -0.03
Cchcr1Q8K2I2 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cchcr1Q8K2I2 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Cchcr1Q8K2I2 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Cchcr1Q8K2I2 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cchcr1Q8K2I2 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cchcr1Q8K2I2 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cchcr1Q8K2I2 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.83□□□□□ -0.04
Cchcr1Q8K2I2 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cchcr1Q8K2I2 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cchcr1Q8K2I2 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.83□□□□□ -0.04
Cchcr1Q8K2I2 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.83□□□□□ -0.04
Cchcr1Q8K2I2 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cchcr1Q8K2I2 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Cchcr1Q8K2I2 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Cchcr1Q8K2I2 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.83□□□□□ -0.04
Cchcr1Q8K2I2 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cchcr1Q8K2I2 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cchcr1Q8K2I2 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cchcr1Q8K2I2 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cchcr1Q8K2I2 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Cchcr1Q8K2I2 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cchcr1Q8K2I2 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.83□□□□□ -0.04
Cchcr1Q8K2I2 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cchcr1Q8K2I2 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cchcr1Q8K2I2 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC14.83□□□□□ -0.04
Cchcr1Q8K2I2 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cchcr1Q8K2I2 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 Daam2-202ENSMUST00000224595 1926 ntBASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms