Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.68□□□□□ -0.22
Trim68Q8K243 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Trim68Q8K243 Gm9826-201ENSMUST00000029124 1299 ntBASIC13.68□□□□□ -0.22
Trim68Q8K243 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim68Q8K243 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim68Q8K243 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.68□□□□□ -0.22
Trim68Q8K243 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim68Q8K243 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim68Q8K243 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim68Q8K243 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trim68Q8K243 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim68Q8K243 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim68Q8K243 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim68Q8K243 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trim68Q8K243 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim68Q8K243 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim68Q8K243 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim68Q8K243 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trim68Q8K243 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim68Q8K243 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim68Q8K243 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim68Q8K243 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim68Q8K243 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim68Q8K243 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.67□□□□□ -0.22
Trim68Q8K243 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim68Q8K243 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim68Q8K243 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim68Q8K243 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim68Q8K243 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Trim68Q8K243 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim68Q8K243 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.67□□□□□ -0.22
Trim68Q8K243 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.67□□□□□ -0.22
Trim68Q8K243 Gm20426-201ENSMUST00000173657 440 ntBASIC13.67□□□□□ -0.22
Trim68Q8K243 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trim68Q8K243 Gm8099-201ENSMUST00000200510 742 ntBASIC13.67□□□□□ -0.22
Trim68Q8K243 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.67□□□□□ -0.22
Trim68Q8K243 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim68Q8K243 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim68Q8K243 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim68Q8K243 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim68Q8K243 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim68Q8K243 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim68Q8K243 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trim68Q8K243 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trim68Q8K243 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trim68Q8K243 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim68Q8K243 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim68Q8K243 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim68Q8K243 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim68Q8K243 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim68Q8K243 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim68Q8K243 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim68Q8K243 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim68Q8K243 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trim68Q8K243 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trim68Q8K243 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim68Q8K243 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim68Q8K243 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.66□□□□□ -0.22
Trim68Q8K243 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trim68Q8K243 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trim68Q8K243 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.66□□□□□ -0.22
Trim68Q8K243 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim68Q8K243 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim68Q8K243 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Trim68Q8K243 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trim68Q8K243 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim68Q8K243 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim68Q8K243 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim68Q8K243 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim68Q8K243 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim68Q8K243 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim68Q8K243 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim68Q8K243 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim68Q8K243 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim68Q8K243 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.66□□□□□ -0.22
Trim68Q8K243 Gm9083-201ENSMUST00000120423 819 ntBASIC13.66□□□□□ -0.22
Trim68Q8K243 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC13.66□□□□□ -0.22
Trim68Q8K243 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim68Q8K243 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trim68Q8K243 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim68Q8K243 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim68Q8K243 Gm27046-201ENSMUST00000182160 463 ntBASIC13.66□□□□□ -0.22
Trim68Q8K243 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.66□□□□□ -0.22
Trim68Q8K243 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.66□□□□□ -0.22
Trim68Q8K243 AU022133-201ENSMUST00000200601 873 ntBASIC13.66□□□□□ -0.22
Trim68Q8K243 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim68Q8K243 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim68Q8K243 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim68Q8K243 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim68Q8K243 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim68Q8K243 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim68Q8K243 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim68Q8K243 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trim68Q8K243 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim68Q8K243 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Trim68Q8K243 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim68Q8K243 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim68Q8K243 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim68Q8K243 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim68Q8K243 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms