Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.86□□□□□ -0.35
CopaQ8CIE6 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CopaQ8CIE6 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CopaQ8CIE6 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.85□□□□□ -0.35
CopaQ8CIE6 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CopaQ8CIE6 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Gm13350-201ENSMUST00000120519 479 ntBASIC12.85□□□□□ -0.35
CopaQ8CIE6 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.85□□□□□ -0.35
CopaQ8CIE6 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.85□□□□□ -0.35
CopaQ8CIE6 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CopaQ8CIE6 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.85□□□□□ -0.35
CopaQ8CIE6 Gm19931-201ENSMUST00000198920 368 ntBASIC12.85□□□□□ -0.35
CopaQ8CIE6 Gm43758-201ENSMUST00000199500 367 ntBASIC12.85□□□□□ -0.35
CopaQ8CIE6 Gm4768-201ENSMUST00000206199 686 ntBASIC12.85□□□□□ -0.35
CopaQ8CIE6 Gm9368-201ENSMUST00000219348 831 ntBASIC12.85□□□□□ -0.35
CopaQ8CIE6 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CopaQ8CIE6 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CopaQ8CIE6 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CopaQ8CIE6 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
CopaQ8CIE6 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.84□□□□□ -0.35
CopaQ8CIE6 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CopaQ8CIE6 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CopaQ8CIE6 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CopaQ8CIE6 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CopaQ8CIE6 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.84□□□□□ -0.35
CopaQ8CIE6 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.84□□□□□ -0.35
CopaQ8CIE6 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CopaQ8CIE6 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.84□□□□□ -0.35
CopaQ8CIE6 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.84□□□□□ -0.35
CopaQ8CIE6 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CopaQ8CIE6 Gm3890-201ENSMUST00000182416 207 ntBASIC12.84□□□□□ -0.35
CopaQ8CIE6 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.84□□□□□ -0.35
CopaQ8CIE6 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.84□□□□□ -0.35
CopaQ8CIE6 Gm6334-201ENSMUST00000207083 228 ntBASIC12.84□□□□□ -0.35
CopaQ8CIE6 Gm10608-202ENSMUST00000213924 676 ntBASIC12.84□□□□□ -0.35
CopaQ8CIE6 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.84□□□□□ -0.35
CopaQ8CIE6 Cts7-204ENSMUST00000225321 1257 ntBASIC12.84□□□□□ -0.35
CopaQ8CIE6 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CopaQ8CIE6 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CopaQ8CIE6 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CopaQ8CIE6 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.84□□□□□ -0.35
CopaQ8CIE6 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CopaQ8CIE6 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CopaQ8CIE6 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CopaQ8CIE6 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CopaQ8CIE6 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.84□□□□□ -0.35
CopaQ8CIE6 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
CopaQ8CIE6 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CopaQ8CIE6 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CopaQ8CIE6 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CopaQ8CIE6 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.84□□□□□ -0.35
CopaQ8CIE6 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CopaQ8CIE6 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms