Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab11fip3Q8CHD8 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rab11fip3Q8CHD8 Gm13142-201ENSMUST00000117213 1453 ntBASIC16.24■□□□□ 0.19
Rab11fip3Q8CHD8 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab11fip3Q8CHD8 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab11fip3Q8CHD8 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab11fip3Q8CHD8 Gm24934-201ENSMUST00000103764 111 ntBASIC16.24■□□□□ 0.19
Rab11fip3Q8CHD8 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
Rab11fip3Q8CHD8 Gm12286-201ENSMUST00000119246 1002 ntBASIC16.24■□□□□ 0.19
Rab11fip3Q8CHD8 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC16.24■□□□□ 0.19
Rab11fip3Q8CHD8 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Rab11fip3Q8CHD8 Gm18827-201ENSMUST00000188341 790 ntBASIC16.24■□□□□ 0.19
Rab11fip3Q8CHD8 Gm44262-201ENSMUST00000204969 372 ntBASIC16.24■□□□□ 0.19
Rab11fip3Q8CHD8 Gm8913-201ENSMUST00000209491 641 ntBASIC16.24■□□□□ 0.19
Rab11fip3Q8CHD8 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC16.24■□□□□ 0.19
Rab11fip3Q8CHD8 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab11fip3Q8CHD8 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rab11fip3Q8CHD8 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Rab11fip3Q8CHD8 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab11fip3Q8CHD8 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rab11fip3Q8CHD8 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab11fip3Q8CHD8 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab11fip3Q8CHD8 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab11fip3Q8CHD8 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab11fip3Q8CHD8 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rab11fip3Q8CHD8 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC16.24■□□□□ 0.19
Rab11fip3Q8CHD8 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab11fip3Q8CHD8 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Rab11fip3Q8CHD8 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Gm5884-201ENSMUST00000036712 1479 ntBASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Gm9083-201ENSMUST00000120423 819 ntBASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Mir7070-201ENSMUST00000183657 86 ntBASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Gm45433-201ENSMUST00000209386 247 ntBASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Gm8385-201ENSMUST00000058999 643 ntBASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab11fip3Q8CHD8 Gm18227-201ENSMUST00000211082 1468 ntBASIC16.22■□□□□ 0.19
Rab11fip3Q8CHD8 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rab11fip3Q8CHD8 Crry-ps-201ENSMUST00000079090 1309 ntBASIC16.22■□□□□ 0.19
Rab11fip3Q8CHD8 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rab11fip3Q8CHD8 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC16.22■□□□□ 0.19
Rab11fip3Q8CHD8 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rab11fip3Q8CHD8 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rab11fip3Q8CHD8 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rab11fip3Q8CHD8 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rab11fip3Q8CHD8 AC164107.1-201ENSMUST00000227730 2161 ntBASIC16.22■□□□□ 0.19
Rab11fip3Q8CHD8 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rab11fip3Q8CHD8 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Rab11fip3Q8CHD8 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC16.22■□□□□ 0.19
Rab11fip3Q8CHD8 Gm7857-201ENSMUST00000117957 358 ntBASIC16.22■□□□□ 0.19
Rab11fip3Q8CHD8 Gm27341-201ENSMUST00000183570 106 ntBASIC16.22■□□□□ 0.19
Rab11fip3Q8CHD8 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC16.22■□□□□ 0.19
Rab11fip3Q8CHD8 Gm19994-201ENSMUST00000217086 586 ntBASIC16.22■□□□□ 0.19
Rab11fip3Q8CHD8 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rab11fip3Q8CHD8 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC16.22■□□□□ 0.19
Rab11fip3Q8CHD8 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC16.22■□□□□ 0.19
Rab11fip3Q8CHD8 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rab11fip3Q8CHD8 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rab11fip3Q8CHD8 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Rab11fip3Q8CHD8 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rab11fip3Q8CHD8 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
Rab11fip3Q8CHD8 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Rab11fip3Q8CHD8 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rab11fip3Q8CHD8 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rab11fip3Q8CHD8 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rab11fip3Q8CHD8 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rab11fip3Q8CHD8 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rab11fip3Q8CHD8 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rab11fip3Q8CHD8 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rab11fip3Q8CHD8 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rab11fip3Q8CHD8 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms