Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Trim9Q8C7M3 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim9Q8C7M3 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim9Q8C7M3 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Trim9Q8C7M3 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim9Q8C7M3 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim9Q8C7M3 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Trim9Q8C7M3 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
Trim9Q8C7M3 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim9Q8C7M3 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim9Q8C7M3 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.83□□□□□ -0.2
Trim9Q8C7M3 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim9Q8C7M3 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim9Q8C7M3 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim9Q8C7M3 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trim9Q8C7M3 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trim9Q8C7M3 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim9Q8C7M3 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim9Q8C7M3 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim9Q8C7M3 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.83□□□□□ -0.2
Trim9Q8C7M3 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.83□□□□□ -0.2
Trim9Q8C7M3 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim9Q8C7M3 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.83□□□□□ -0.2
Trim9Q8C7M3 Gm13342-201ENSMUST00000121055 207 ntBASIC13.83□□□□□ -0.2
Trim9Q8C7M3 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.83□□□□□ -0.2
Trim9Q8C7M3 Gm23119-201ENSMUST00000158610 140 ntBASIC13.83□□□□□ -0.2
Trim9Q8C7M3 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
Trim9Q8C7M3 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.83□□□□□ -0.2
Trim9Q8C7M3 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.83□□□□□ -0.2
Trim9Q8C7M3 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.83□□□□□ -0.2
Trim9Q8C7M3 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.83□□□□□ -0.2
Trim9Q8C7M3 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.83□□□□□ -0.2
Trim9Q8C7M3 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.83□□□□□ -0.2
Trim9Q8C7M3 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim9Q8C7M3 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim9Q8C7M3 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim9Q8C7M3 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim9Q8C7M3 Gm25857-201ENSMUST00000082788 129 ntBASIC13.83□□□□□ -0.2
Trim9Q8C7M3 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trim9Q8C7M3 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim9Q8C7M3 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim9Q8C7M3 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim9Q8C7M3 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim9Q8C7M3 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Trim9Q8C7M3 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim9Q8C7M3 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Gm38158-201ENSMUST00000194617 339 ntBASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.82□□□□□ -0.2
Trim9Q8C7M3 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trim9Q8C7M3 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim9Q8C7M3 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim9Q8C7M3 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim9Q8C7M3 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim9Q8C7M3 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.81□□□□□ -0.2
Trim9Q8C7M3 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim9Q8C7M3 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim9Q8C7M3 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim9Q8C7M3 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim9Q8C7M3 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Trim9Q8C7M3 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim9Q8C7M3 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim9Q8C7M3 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim9Q8C7M3 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim9Q8C7M3 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim9Q8C7M3 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim9Q8C7M3 Gm37424-201ENSMUST00000191727 561 ntBASIC13.81□□□□□ -0.2
Trim9Q8C7M3 Gm39404-201ENSMUST00000216350 313 ntBASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms