Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm24548-201ENSMUST00000158650 108 ntBASIC12.95□□□□□ -0.34
Trub1Q8C0D0 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Gm44405-201ENSMUST00000198952 126 ntBASIC12.95□□□□□ -0.34
Trub1Q8C0D0 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trub1Q8C0D0 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.94□□□□□ -0.34
Trub1Q8C0D0 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trub1Q8C0D0 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trub1Q8C0D0 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.94□□□□□ -0.34
Trub1Q8C0D0 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trub1Q8C0D0 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trub1Q8C0D0 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trub1Q8C0D0 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trub1Q8C0D0 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trub1Q8C0D0 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trub1Q8C0D0 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trub1Q8C0D0 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trub1Q8C0D0 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trub1Q8C0D0 Gm13736-201ENSMUST00000119272 253 ntBASIC12.94□□□□□ -0.34
Trub1Q8C0D0 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.94□□□□□ -0.34
Trub1Q8C0D0 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.94□□□□□ -0.34
Trub1Q8C0D0 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trub1Q8C0D0 Gm27243-201ENSMUST00000183964 521 ntBASIC12.94□□□□□ -0.34
Trub1Q8C0D0 Gm45925-201ENSMUST00000218882 744 ntBASIC12.94□□□□□ -0.34
Trub1Q8C0D0 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trub1Q8C0D0 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trub1Q8C0D0 Gm24136-201ENSMUST00000083374 165 ntBASIC12.94□□□□□ -0.34
Trub1Q8C0D0 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trub1Q8C0D0 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trub1Q8C0D0 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.94□□□□□ -0.34
Trub1Q8C0D0 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trub1Q8C0D0 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.94□□□□□ -0.34
Trub1Q8C0D0 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trub1Q8C0D0 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trub1Q8C0D0 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trub1Q8C0D0 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trub1Q8C0D0 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trub1Q8C0D0 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trub1Q8C0D0 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trub1Q8C0D0 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.93□□□□□ -0.34
Trub1Q8C0D0 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trub1Q8C0D0 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.93□□□□□ -0.34
Trub1Q8C0D0 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trub1Q8C0D0 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trub1Q8C0D0 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trub1Q8C0D0 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trub1Q8C0D0 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trub1Q8C0D0 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trub1Q8C0D0 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trub1Q8C0D0 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trub1Q8C0D0 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trub1Q8C0D0 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.93□□□□□ -0.34
Trub1Q8C0D0 Gm22018-201ENSMUST00000104357 131 ntBASIC12.93□□□□□ -0.34
Trub1Q8C0D0 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.93□□□□□ -0.34
Trub1Q8C0D0 Snora78-201ENSMUST00000158630 128 ntBASIC12.93□□□□□ -0.34
Trub1Q8C0D0 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trub1Q8C0D0 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trub1Q8C0D0 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.93□□□□□ -0.34
Trub1Q8C0D0 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.93□□□□□ -0.34
Trub1Q8C0D0 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.93□□□□□ -0.34
Trub1Q8C0D0 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.93□□□□□ -0.34
Trub1Q8C0D0 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.93□□□□□ -0.34
Trub1Q8C0D0 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trub1Q8C0D0 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trub1Q8C0D0 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trub1Q8C0D0 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trub1Q8C0D0 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trub1Q8C0D0 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trub1Q8C0D0 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trub1Q8C0D0 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trub1Q8C0D0 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.93□□□□□ -0.34
Trub1Q8C0D0 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trub1Q8C0D0 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.93□□□□□ -0.34
Trub1Q8C0D0 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms