Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Sfr1Q8BP27 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sfr1Q8BP27 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.86□□□□□ -0.35
Sfr1Q8BP27 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sfr1Q8BP27 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Sfr1Q8BP27 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sfr1Q8BP27 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sfr1Q8BP27 Gm12502-201ENSMUST00000120197 444 ntBASIC12.86□□□□□ -0.35
Sfr1Q8BP27 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.86□□□□□ -0.35
Sfr1Q8BP27 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Sfr1Q8BP27 Gm27572-201ENSMUST00000183702 255 ntBASIC12.86□□□□□ -0.35
Sfr1Q8BP27 Gm42627-201ENSMUST00000197347 224 ntBASIC12.86□□□□□ -0.35
Sfr1Q8BP27 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sfr1Q8BP27 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sfr1Q8BP27 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sfr1Q8BP27 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sfr1Q8BP27 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sfr1Q8BP27 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sfr1Q8BP27 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sfr1Q8BP27 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sfr1Q8BP27 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sfr1Q8BP27 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sfr1Q8BP27 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sfr1Q8BP27 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Sfr1Q8BP27 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sfr1Q8BP27 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Sfr1Q8BP27 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sfr1Q8BP27 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.85□□□□□ -0.35
Sfr1Q8BP27 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Gm43630-201ENSMUST00000201550 776 ntBASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Gm9899-201ENSMUST00000065519 555 ntBASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.85□□□□□ -0.35
Sfr1Q8BP27 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Sfr1Q8BP27 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Gm24548-201ENSMUST00000158650 108 ntBASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Gm8738-201ENSMUST00000172606 329 ntBASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Gm43133-201ENSMUST00000197472 463 ntBASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Gm5904-201ENSMUST00000210286 865 ntBASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Gm6013-201ENSMUST00000212264 699 ntBASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.84□□□□□ -0.35
Sfr1Q8BP27 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Sfr1Q8BP27 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms