Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm25076-201ENSMUST00000104098 132 ntBASIC16.16■□□□□ 0.18
Col16a1Q8BLX7 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Col16a1Q8BLX7 Gm12816-201ENSMUST00000118069 1212 ntBASIC16.16■□□□□ 0.18
Col16a1Q8BLX7 Gm12628-201ENSMUST00000122193 382 ntBASIC16.16■□□□□ 0.18
Col16a1Q8BLX7 Gm8815-201ENSMUST00000173809 620 ntBASIC16.16■□□□□ 0.18
Col16a1Q8BLX7 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Col16a1Q8BLX7 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col16a1Q8BLX7 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Col16a1Q8BLX7 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Col16a1Q8BLX7 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Col16a1Q8BLX7 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC16.16■□□□□ 0.18
Col16a1Q8BLX7 AC154184.3-201ENSMUST00000225620 1090 ntBASIC16.16■□□□□ 0.18
Col16a1Q8BLX7 AC112945.1-201ENSMUST00000226413 514 ntBASIC16.16■□□□□ 0.18
Col16a1Q8BLX7 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Col16a1Q8BLX7 Gm5879-201ENSMUST00000089501 1209 ntBASIC16.16■□□□□ 0.18
Col16a1Q8BLX7 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col16a1Q8BLX7 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col16a1Q8BLX7 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col16a1Q8BLX7 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Col16a1Q8BLX7 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Col16a1Q8BLX7 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col16a1Q8BLX7 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col16a1Q8BLX7 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 Gm12990-201ENSMUST00000120372 468 ntBASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 Gm18367-201ENSMUST00000176139 600 ntBASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 AC165260.2-203ENSMUST00000224237 336 ntBASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col16a1Q8BLX7 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Col16a1Q8BLX7 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC16.14■□□□□ 0.18
Col16a1Q8BLX7 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Col16a1Q8BLX7 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col16a1Q8BLX7 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col16a1Q8BLX7 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Col16a1Q8BLX7 AC173482.6-201ENSMUST00000225889 1741 ntBASIC16.14■□□□□ 0.17
Col16a1Q8BLX7 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC16.14■□□□□ 0.17
Col16a1Q8BLX7 Gm15004-201ENSMUST00000119192 630 ntBASIC16.14■□□□□ 0.17
Col16a1Q8BLX7 Gm11836-201ENSMUST00000121022 441 ntBASIC16.14■□□□□ 0.17
Col16a1Q8BLX7 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC16.14■□□□□ 0.17
Col16a1Q8BLX7 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC16.14■□□□□ 0.17
Col16a1Q8BLX7 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC16.14■□□□□ 0.17
Col16a1Q8BLX7 Gm4654-201ENSMUST00000183305 982 ntBASIC16.14■□□□□ 0.17
Col16a1Q8BLX7 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC16.14■□□□□ 0.17
Col16a1Q8BLX7 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Col16a1Q8BLX7 Gm3619-201ENSMUST00000219947 775 ntBASIC16.14■□□□□ 0.17
Col16a1Q8BLX7 Gm19009-201ENSMUST00000223072 823 ntBASIC16.14■□□□□ 0.17
Col16a1Q8BLX7 CT025553.1-201ENSMUST00000226292 299 ntBASIC16.14■□□□□ 0.17
Col16a1Q8BLX7 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col16a1Q8BLX7 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col16a1Q8BLX7 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col16a1Q8BLX7 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Col16a1Q8BLX7 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col16a1Q8BLX7 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col16a1Q8BLX7 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.14■□□□□ 0.17
Col16a1Q8BLX7 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col16a1Q8BLX7 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Col16a1Q8BLX7 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col16a1Q8BLX7 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col16a1Q8BLX7 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col16a1Q8BLX7 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col16a1Q8BLX7 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Col16a1Q8BLX7 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Col16a1Q8BLX7 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col16a1Q8BLX7 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col16a1Q8BLX7 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col16a1Q8BLX7 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC16.13■□□□□ 0.17
Col16a1Q8BLX7 Gm13182-201ENSMUST00000122241 312 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms