Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40bQ80W14 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40bQ80W14 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40bQ80W14 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40bQ80W14 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Prpf40bQ80W14 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Prpf40bQ80W14 Gm43081-201ENSMUST00000199082 1380 ntBASIC14.53□□□□□ -0.08
Prpf40bQ80W14 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40bQ80W14 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40bQ80W14 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40bQ80W14 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.53□□□□□ -0.08
Prpf40bQ80W14 Gm3096-201ENSMUST00000185770 364 ntBASIC14.53□□□□□ -0.08
Prpf40bQ80W14 Gm9004-201ENSMUST00000218739 1222 ntBASIC14.53□□□□□ -0.08
Prpf40bQ80W14 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Prpf40bQ80W14 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40bQ80W14 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40bQ80W14 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40bQ80W14 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Prpf40bQ80W14 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40bQ80W14 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Prpf40bQ80W14 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Prpf40bQ80W14 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Prpf40bQ80W14 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Prpf40bQ80W14 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Prpf40bQ80W14 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Prpf40bQ80W14 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Prpf40bQ80W14 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Prpf40bQ80W14 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.09
Prpf40bQ80W14 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Prpf40bQ80W14 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Prpf40bQ80W14 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Prpf40bQ80W14 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Prpf40bQ80W14 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.52□□□□□ -0.09
Prpf40bQ80W14 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Prpf40bQ80W14 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Prpf40bQ80W14 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.52□□□□□ -0.09
Prpf40bQ80W14 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Prpf40bQ80W14 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Prpf40bQ80W14 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Prpf40bQ80W14 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Prpf40bQ80W14 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Prpf40bQ80W14 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Prpf40bQ80W14 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Prpf40bQ80W14 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Prpf40bQ80W14 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Prpf40bQ80W14 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Prpf40bQ80W14 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Prpf40bQ80W14 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Prpf40bQ80W14 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Prpf40bQ80W14 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Prpf40bQ80W14 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.52□□□□□ -0.09
Prpf40bQ80W14 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf40bQ80W14 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf40bQ80W14 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Prpf40bQ80W14 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf40bQ80W14 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf40bQ80W14 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf40bQ80W14 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf40bQ80W14 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf40bQ80W14 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf40bQ80W14 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf40bQ80W14 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.51□□□□□ -0.09
Prpf40bQ80W14 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf40bQ80W14 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf40bQ80W14 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf40bQ80W14 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf40bQ80W14 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Prpf40bQ80W14 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
Prpf40bQ80W14 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.51□□□□□ -0.09
Prpf40bQ80W14 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf40bQ80W14 Gm43058-201ENSMUST00000197645 625 ntBASIC14.51□□□□□ -0.09
Prpf40bQ80W14 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf40bQ80W14 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf40bQ80W14 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf40bQ80W14 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf40bQ80W14 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf40bQ80W14 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf40bQ80W14 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf40bQ80W14 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf40bQ80W14 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf40bQ80W14 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf40bQ80W14 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.51□□□□□ -0.09
Prpf40bQ80W14 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf40bQ80W14 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Prpf40bQ80W14 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf40bQ80W14 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf40bQ80W14 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Prpf40bQ80W14 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Prpf40bQ80W14 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Prpf40bQ80W14 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Prpf40bQ80W14 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.5□□□□□ -0.09
Prpf40bQ80W14 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Prpf40bQ80W14 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Prpf40bQ80W14 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Prpf40bQ80W14 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Prpf40bQ80W14 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Prpf40bQ80W14 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Prpf40bQ80W14 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Prpf40bQ80W14 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Prpf40bQ80W14 Rubie-203ENSMUST00000227803 2430 ntBASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms