Protein–RNA interactions for Protein: Q80U56

Avl9, Late secretory pathway protein AVL9 homolog, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Avl9Q80U56 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Avl9Q80U56 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Avl9Q80U56 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Avl9Q80U56 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.18□□□□□ -0.46
Avl9Q80U56 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Avl9Q80U56 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Avl9Q80U56 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.18□□□□□ -0.46
Avl9Q80U56 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Avl9Q80U56 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Gm15808-201ENSMUST00000119046 604 ntBASIC12.18□□□□□ -0.46
Avl9Q80U56 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Avl9Q80U56 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Gm3096-201ENSMUST00000185770 364 ntBASIC12.18□□□□□ -0.46
Avl9Q80U56 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.18□□□□□ -0.46
Avl9Q80U56 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.18□□□□□ -0.46
Avl9Q80U56 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.18□□□□□ -0.46
Avl9Q80U56 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.18□□□□□ -0.46
Avl9Q80U56 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.18□□□□□ -0.46
Avl9Q80U56 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.18□□□□□ -0.46
Avl9Q80U56 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Avl9Q80U56 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Avl9Q80U56 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.18□□□□□ -0.46
Avl9Q80U56 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Avl9Q80U56 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Avl9Q80U56 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Avl9Q80U56 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Avl9Q80U56 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Avl9Q80U56 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.17□□□□□ -0.46
Avl9Q80U56 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Avl9Q80U56 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Avl9Q80U56 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Avl9Q80U56 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Avl9Q80U56 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Avl9Q80U56 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Avl9Q80U56 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Avl9Q80U56 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.17□□□□□ -0.46
Avl9Q80U56 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Avl9Q80U56 Gm15703-201ENSMUST00000120250 880 ntBASIC12.17□□□□□ -0.46
Avl9Q80U56 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.17□□□□□ -0.46
Avl9Q80U56 Gm15276-201ENSMUST00000145953 498 ntBASIC12.17□□□□□ -0.46
Avl9Q80U56 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Avl9Q80U56 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Avl9Q80U56 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Avl9Q80U56 Gm18056-201ENSMUST00000207670 568 ntBASIC12.17□□□□□ -0.46
Avl9Q80U56 Gm18061-201ENSMUST00000208350 562 ntBASIC12.17□□□□□ -0.46
Avl9Q80U56 Gm18063-201ENSMUST00000208529 568 ntBASIC12.17□□□□□ -0.46
Avl9Q80U56 Gm18052-201ENSMUST00000208750 559 ntBASIC12.17□□□□□ -0.46
Avl9Q80U56 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Avl9Q80U56 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Avl9Q80U56 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Avl9Q80U56 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Avl9Q80U56 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Avl9Q80U56 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Avl9Q80U56 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Avl9Q80U56 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Avl9Q80U56 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Avl9Q80U56 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Avl9Q80U56 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Avl9Q80U56 Gm10652-201ENSMUST00000199790 2622 ntBASIC12.17□□□□□ -0.46
Avl9Q80U56 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Avl9Q80U56 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Avl9Q80U56 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Avl9Q80U56 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Avl9Q80U56 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Avl9Q80U56 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms