Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Gm24679-201ENSMUST00000158762 111 ntBASIC10.62□□□□□ -0.71
Rif1Q6PR54 Gm25053-202ENSMUST00000199731 132 ntBASIC10.62□□□□□ -0.71
Rif1Q6PR54 Gm43854-201ENSMUST00000200418 394 ntBASIC10.62□□□□□ -0.71
Rif1Q6PR54 Gm45758-201ENSMUST00000212448 1006 ntBASIC10.62□□□□□ -0.71
Rif1Q6PR54 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.62□□□□□ -0.71
Rif1Q6PR54 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 n-R5s185-201ENSMUST00000083953 119 ntBASIC10.62□□□□□ -0.71
Rif1Q6PR54 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rif1Q6PR54 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Gm23604-201ENSMUST00000104311 132 ntBASIC10.61□□□□□ -0.71
Rif1Q6PR54 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Gm13492-201ENSMUST00000119772 665 ntBASIC10.61□□□□□ -0.71
Rif1Q6PR54 Gm12030-201ENSMUST00000121917 223 ntBASIC10.61□□□□□ -0.71
Rif1Q6PR54 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC10.61□□□□□ -0.71
Rif1Q6PR54 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Gm19587-201ENSMUST00000191395 545 ntBASIC10.61□□□□□ -0.71
Rif1Q6PR54 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC10.61□□□□□ -0.71
Rif1Q6PR54 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rif1Q6PR54 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rif1Q6PR54 Gm22920-201ENSMUST00000102175 109 ntBASIC10.6□□□□□ -0.71
Rif1Q6PR54 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Gm24954-201ENSMUST00000178831 110 ntBASIC10.6□□□□□ -0.71
Rif1Q6PR54 Gm3726-201ENSMUST00000203110 785 ntBASIC10.6□□□□□ -0.71
Rif1Q6PR54 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC10.6□□□□□ -0.71
Rif1Q6PR54 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.6□□□□□ -0.71
Rif1Q6PR54 AC131690.1-201ENSMUST00000218406 374 ntBASIC10.6□□□□□ -0.71
Rif1Q6PR54 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC10.6□□□□□ -0.71
Rif1Q6PR54 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Gm12020-201ENSMUST00000119030 2042 ntBASIC10.6□□□□□ -0.71
Rif1Q6PR54 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Gm15725-201ENSMUST00000119947 1090 ntBASIC10.6□□□□□ -0.71
Rif1Q6PR54 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Gm18123-201ENSMUST00000210874 822 ntBASIC10.6□□□□□ -0.71
Rif1Q6PR54 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rif1Q6PR54 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
Rif1Q6PR54 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC10.6□□□□□ -0.71
Rif1Q6PR54 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms