Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.37□□□□□ -0.43
Scaf4Q6PFF0 Gm8099-201ENSMUST00000200510 742 ntBASIC12.37□□□□□ -0.43
Scaf4Q6PFF0 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.37□□□□□ -0.43
Scaf4Q6PFF0 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.37□□□□□ -0.43
Scaf4Q6PFF0 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.37□□□□□ -0.43
Scaf4Q6PFF0 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.37□□□□□ -0.43
Scaf4Q6PFF0 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.37□□□□□ -0.43
Scaf4Q6PFF0 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scaf4Q6PFF0 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scaf4Q6PFF0 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scaf4Q6PFF0 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scaf4Q6PFF0 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scaf4Q6PFF0 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scaf4Q6PFF0 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Scaf4Q6PFF0 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scaf4Q6PFF0 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scaf4Q6PFF0 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Scaf4Q6PFF0 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.37□□□□□ -0.43
Scaf4Q6PFF0 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scaf4Q6PFF0 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scaf4Q6PFF0 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Scaf4Q6PFF0 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scaf4Q6PFF0 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scaf4Q6PFF0 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Gm24231-201ENSMUST00000104315 133 ntBASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Gm12384-201ENSMUST00000119228 919 ntBASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Gm2495-201ENSMUST00000191160 466 ntBASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Scaf4Q6PFF0 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Gm20949-201ENSMUST00000206478 952 ntBASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scaf4Q6PFF0 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms