Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chd4Q6PDQ2 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chd4Q6PDQ2 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC16.1■□□□□ 0.17
Chd4Q6PDQ2 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC16.1■□□□□ 0.17
Chd4Q6PDQ2 Gm7600-201ENSMUST00000209657 785 ntBASIC16.1■□□□□ 0.17
Chd4Q6PDQ2 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC16.1■□□□□ 0.17
Chd4Q6PDQ2 Gm18974-201ENSMUST00000221478 1031 ntBASIC16.1■□□□□ 0.17
Chd4Q6PDQ2 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chd4Q6PDQ2 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Chd4Q6PDQ2 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chd4Q6PDQ2 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chd4Q6PDQ2 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chd4Q6PDQ2 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chd4Q6PDQ2 AC116503.1-201ENSMUST00000215445 2192 ntBASIC16.1■□□□□ 0.17
Chd4Q6PDQ2 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chd4Q6PDQ2 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC16.1■□□□□ 0.17
Chd4Q6PDQ2 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chd4Q6PDQ2 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chd4Q6PDQ2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chd4Q6PDQ2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Chd4Q6PDQ2 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 AC112945.1-201ENSMUST00000226413 514 ntBASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Ssr1-203ENSMUST00000225246 1825 ntBASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Gm23912-201ENSMUST00000104687 87 ntBASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Gm11892-201ENSMUST00000117711 1202 ntBASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Gm13888-201ENSMUST00000119148 422 ntBASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Gm15207-201ENSMUST00000119259 442 ntBASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Gm22138-201ENSMUST00000158748 128 ntBASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Gm29499-201ENSMUST00000189151 486 ntBASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Gm28329-201ENSMUST00000191208 689 ntBASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Gm29171-201ENSMUST00000191397 486 ntBASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Gm44270-201ENSMUST00000203084 1234 ntBASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 AC122408.1-201ENSMUST00000218949 218 ntBASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 CT030637.1-201ENSMUST00000228016 669 ntBASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Gm45779-201ENSMUST00000212189 4064 ntBASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chd4Q6PDQ2 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chd4Q6PDQ2 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chd4Q6PDQ2 Gm9129-201ENSMUST00000218173 1689 ntBASIC16.08■□□□□ 0.17
Chd4Q6PDQ2 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chd4Q6PDQ2 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Chd4Q6PDQ2 Gm11836-201ENSMUST00000121022 441 ntBASIC16.08■□□□□ 0.16
Chd4Q6PDQ2 Gm4726-201ENSMUST00000135604 736 ntBASIC16.08■□□□□ 0.16
Chd4Q6PDQ2 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC16.08■□□□□ 0.16
Chd4Q6PDQ2 Gm6019-201ENSMUST00000148369 736 ntBASIC16.08■□□□□ 0.16
Chd4Q6PDQ2 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC16.08■□□□□ 0.16
Chd4Q6PDQ2 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Chd4Q6PDQ2 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd4Q6PDQ2 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC16.08■□□□□ 0.16
Chd4Q6PDQ2 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC16.08■□□□□ 0.16
Chd4Q6PDQ2 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Chd4Q6PDQ2 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd4Q6PDQ2 Snora73b-201ENSMUST00000083419 205 ntBASIC16.08■□□□□ 0.16
Chd4Q6PDQ2 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Chd4Q6PDQ2 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Chd4Q6PDQ2 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd4Q6PDQ2 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd4Q6PDQ2 Gm37644-201ENSMUST00000192190 2270 ntBASIC16.08■□□□□ 0.16
Chd4Q6PDQ2 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Chd4Q6PDQ2 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd4Q6PDQ2 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
Chd4Q6PDQ2 Gm18782-201ENSMUST00000209023 1399 ntBASIC16.08■□□□□ 0.16
Chd4Q6PDQ2 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd4Q6PDQ2 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd4Q6PDQ2 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd4Q6PDQ2 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms