Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
VcanQ62059 Gm12986-201ENSMUST00000119037 967 ntBASIC11.47□□□□□ -0.57
VcanQ62059 Gm14993-201ENSMUST00000121180 164 ntBASIC11.47□□□□□ -0.57
VcanQ62059 Gm18367-201ENSMUST00000176139 600 ntBASIC11.47□□□□□ -0.57
VcanQ62059 Gm2345-201ENSMUST00000193451 589 ntBASIC11.47□□□□□ -0.57
VcanQ62059 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VcanQ62059 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
VcanQ62059 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
VcanQ62059 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VcanQ62059 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VcanQ62059 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VcanQ62059 Gm5421-201ENSMUST00000181698 2354 ntBASIC11.47□□□□□ -0.57
VcanQ62059 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.47□□□□□ -0.57
VcanQ62059 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VcanQ62059 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC11.47□□□□□ -0.57
VcanQ62059 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.47□□□□□ -0.57
VcanQ62059 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VcanQ62059 Gm23680-201ENSMUST00000083162 164 ntBASIC11.47□□□□□ -0.57
VcanQ62059 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
VcanQ62059 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
VcanQ62059 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
VcanQ62059 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VcanQ62059 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VcanQ62059 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VcanQ62059 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VcanQ62059 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
VcanQ62059 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VcanQ62059 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
VcanQ62059 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
VcanQ62059 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
VcanQ62059 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VcanQ62059 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
VcanQ62059 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VcanQ62059 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
VcanQ62059 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.46□□□□□ -0.57
VcanQ62059 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
VcanQ62059 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
VcanQ62059 Gm23604-201ENSMUST00000104311 132 ntBASIC11.46□□□□□ -0.57
VcanQ62059 Gm22388-201ENSMUST00000158194 248 ntBASIC11.46□□□□□ -0.57
VcanQ62059 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC11.46□□□□□ -0.57
VcanQ62059 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
VcanQ62059 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
VcanQ62059 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC11.46□□□□□ -0.57
VcanQ62059 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.46□□□□□ -0.57
VcanQ62059 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VcanQ62059 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.57
VcanQ62059 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
VcanQ62059 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VcanQ62059 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
VcanQ62059 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
VcanQ62059 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.46□□□□□ -0.57
VcanQ62059 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
VcanQ62059 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
VcanQ62059 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
VcanQ62059 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
VcanQ62059 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
VcanQ62059 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
VcanQ62059 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
VcanQ62059 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
VcanQ62059 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
VcanQ62059 Gm13351-201ENSMUST00000118087 414 ntBASIC11.46□□□□□ -0.58
VcanQ62059 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
VcanQ62059 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.46□□□□□ -0.58
VcanQ62059 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
VcanQ62059 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
VcanQ62059 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
VcanQ62059 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
VcanQ62059 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
VcanQ62059 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
VcanQ62059 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
VcanQ62059 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
VcanQ62059 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
VcanQ62059 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
VcanQ62059 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
VcanQ62059 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
VcanQ62059 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
VcanQ62059 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VcanQ62059 Gm12164-201ENSMUST00000121695 551 ntBASIC11.45□□□□□ -0.58
VcanQ62059 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC11.45□□□□□ -0.58
VcanQ62059 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
VcanQ62059 Gm37782-201ENSMUST00000194879 678 ntBASIC11.45□□□□□ -0.58
VcanQ62059 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VcanQ62059 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.45□□□□□ -0.58
VcanQ62059 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VcanQ62059 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
VcanQ62059 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
VcanQ62059 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
VcanQ62059 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VcanQ62059 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
VcanQ62059 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
VcanQ62059 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VcanQ62059 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VcanQ62059 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.45□□□□□ -0.58
VcanQ62059 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VcanQ62059 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VcanQ62059 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC11.45□□□□□ -0.58
VcanQ62059 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC11.45□□□□□ -0.58
VcanQ62059 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC11.45□□□□□ -0.58
VcanQ62059 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
VcanQ62059 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms