Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Six4Q61321 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six4Q61321 Gm14999-201ENSMUST00000121039 624 ntBASIC12.66□□□□□ -0.38
Six4Q61321 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.66□□□□□ -0.38
Six4Q61321 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.66□□□□□ -0.38
Six4Q61321 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.66□□□□□ -0.38
Six4Q61321 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.66□□□□□ -0.38
Six4Q61321 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.66□□□□□ -0.38
Six4Q61321 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Six4Q61321 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six4Q61321 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.66□□□□□ -0.38
Six4Q61321 Gm45331-201ENSMUST00000209868 554 ntBASIC12.66□□□□□ -0.38
Six4Q61321 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Six4Q61321 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six4Q61321 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Six4Q61321 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Six4Q61321 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Six4Q61321 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six4Q61321 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Six4Q61321 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six4Q61321 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.66□□□□□ -0.38
Six4Q61321 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.66□□□□□ -0.38
Six4Q61321 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six4Q61321 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.66□□□□□ -0.38
Six4Q61321 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.66□□□□□ -0.38
Six4Q61321 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Six4Q61321 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Six4Q61321 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.66□□□□□ -0.38
Six4Q61321 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six4Q61321 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.66□□□□□ -0.38
Six4Q61321 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six4Q61321 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Six4Q61321 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Six4Q61321 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Six4Q61321 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Six4Q61321 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Six4Q61321 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Six4Q61321 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Six4Q61321 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Six4Q61321 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.65□□□□□ -0.38
Six4Q61321 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Six4Q61321 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.65□□□□□ -0.38
Six4Q61321 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Six4Q61321 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Six4Q61321 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Six4Q61321 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Six4Q61321 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.65□□□□□ -0.38
Six4Q61321 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.65□□□□□ -0.38
Six4Q61321 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Six4Q61321 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Six4Q61321 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Six4Q61321 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
Six4Q61321 Gm15198-201ENSMUST00000117283 177 ntBASIC12.65□□□□□ -0.38
Six4Q61321 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Six4Q61321 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.65□□□□□ -0.38
Six4Q61321 Gm23119-201ENSMUST00000158610 140 ntBASIC12.65□□□□□ -0.38
Six4Q61321 Mir1938-201ENSMUST00000158746 100 ntBASIC12.65□□□□□ -0.38
Six4Q61321 Gm2991-201ENSMUST00000173338 480 ntBASIC12.65□□□□□ -0.38
Six4Q61321 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Six4Q61321 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Six4Q61321 Gm42937-201ENSMUST00000197360 752 ntBASIC12.65□□□□□ -0.38
Six4Q61321 Gm43438-201ENSMUST00000198133 379 ntBASIC12.65□□□□□ -0.38
Six4Q61321 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.65□□□□□ -0.38
Six4Q61321 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Six4Q61321 Cts7-204ENSMUST00000225321 1257 ntBASIC12.65□□□□□ -0.38
Six4Q61321 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Six4Q61321 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Six4Q61321 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Six4Q61321 Gm10076-201ENSMUST00000073238 384 ntBASIC12.65□□□□□ -0.38
Six4Q61321 Gm24136-201ENSMUST00000083374 165 ntBASIC12.65□□□□□ -0.38
Six4Q61321 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Six4Q61321 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Six4Q61321 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Six4Q61321 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Six4Q61321 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Six4Q61321 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Six4Q61321 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Six4Q61321 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Six4Q61321 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Six4Q61321 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Six4Q61321 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Six4Q61321 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Six4Q61321 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Six4Q61321 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Six4Q61321 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Six4Q61321 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Six4Q61321 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Six4Q61321 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Six4Q61321 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.64□□□□□ -0.39
Six4Q61321 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Six4Q61321 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Six4Q61321 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Six4Q61321 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Six4Q61321 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Six4Q61321 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.64□□□□□ -0.39
Six4Q61321 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Six4Q61321 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Six4Q61321 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Six4Q61321 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Six4Q61321 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms