Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 Gm12501-201ENSMUST00000119163 529 ntBASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ccdc85aQ5SP85 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Gm17391-201ENSMUST00000171036 126 ntBASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Gm8365-201ENSMUST00000197334 648 ntBASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Gm42937-201ENSMUST00000197360 752 ntBASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Gm21811-201ENSMUST00000096485 930 ntBASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc85aQ5SP85 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc85aQ5SP85 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ccdc85aQ5SP85 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc85aQ5SP85 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc85aQ5SP85 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc85aQ5SP85 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc85aQ5SP85 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Ccdc85aQ5SP85 Gm12314-201ENSMUST00000118104 538 ntBASIC13.87□□□□□ -0.19
Ccdc85aQ5SP85 Gm14460-201ENSMUST00000121511 639 ntBASIC13.87□□□□□ -0.19
Ccdc85aQ5SP85 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.87□□□□□ -0.19
Ccdc85aQ5SP85 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc85aQ5SP85 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc85aQ5SP85 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.87□□□□□ -0.19
Ccdc85aQ5SP85 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC13.87□□□□□ -0.19
Ccdc85aQ5SP85 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Ccdc85aQ5SP85 Gm43916-201ENSMUST00000205062 967 ntBASIC13.87□□□□□ -0.19
Ccdc85aQ5SP85 Gm7600-201ENSMUST00000209657 785 ntBASIC13.87□□□□□ -0.19
Ccdc85aQ5SP85 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.87□□□□□ -0.19
Ccdc85aQ5SP85 AC133602.1-201ENSMUST00000227510 509 ntBASIC13.87□□□□□ -0.19
Ccdc85aQ5SP85 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc85aQ5SP85 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms