Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm24932-201ENSMUST00000103763 110 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm24115-201ENSMUST00000103799 110 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm22190-201ENSMUST00000103827 110 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm22191-201ENSMUST00000103831 110 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm24721-201ENSMUST00000103849 110 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm28018-201ENSMUST00000103869 110 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm26399-201ENSMUST00000103937 110 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm25349-201ENSMUST00000177728 110 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm23616-201ENSMUST00000177797 110 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm25871-201ENSMUST00000177816 110 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm24752-201ENSMUST00000178240 110 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm24496-201ENSMUST00000178287 110 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm25649-201ENSMUST00000178476 110 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm25548-201ENSMUST00000178681 110 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm23147-201ENSMUST00000178841 110 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm26095-201ENSMUST00000179270 110 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm22171-201ENSMUST00000179283 110 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm23936-201ENSMUST00000179354 110 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm22619-201ENSMUST00000179516 110 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm25255-201ENSMUST00000179579 110 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm24755-201ENSMUST00000179691 110 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm26506-201ENSMUST00000179692 110 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm25086-201ENSMUST00000179931 110 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm23243-201ENSMUST00000180047 110 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm24659-201ENSMUST00000180212 110 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm24169-201ENSMUST00000180244 110 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm23689-201ENSMUST00000180354 110 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Mir6990-201ENSMUST00000183724 91 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm27359-201ENSMUST00000184153 110 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm27785-201ENSMUST00000184268 110 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm27466-201ENSMUST00000184396 110 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm27703-201ENSMUST00000184836 110 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Ighv1-51-201ENSMUST00000192903 354 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 AC155252.2-201ENSMUST00000226946 680 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 AC154806.6-201ENSMUST00000228192 202 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm5766-201ENSMUST00000160520 1977 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms